G498010


Basic Information

Item Value
gene id G498010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33513230 ~ 33513454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU565790
aatcctacaatgtgattttctggattttttttcttattttgtctgtcatagttgaagtgtacctatggtgaaaattacaggcctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgcccactgtATATTGTATGCTCAACAAAATGTGAATGATATTacattgctcagagaaagatttAGTAACAAGTAATACATTTTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU565790 True 225 lncRNA 0.32 1 33513230 33513454

Neighbor

gene id symbol gene type direction distance location
LOC110525817 LOC106585059 coding upstream 4959 33465992 ~ 33508271 (+)
LOC110525816 LOC106585060 coding upstream 48454 33447246 ~ 33465055 (+)
LOC110525815 LOC106585058 coding upstream 73559 33420413 ~ 33439671 (+)
LOC110525814 LOC106585056 coding upstream 145795 33352672 ~ 33367435 (+)
LOC110525811 rpl6 coding upstream 181633 33327503 ~ 33331597 (+)
LOC110525819 slc25a1 coding downstream 1796 33515250 ~ 33568701 (+)
LOC110525821 LOC106585065 coding downstream 87230 33600684 ~ 33691211 (+)
LOC110525823 LOC106585068 coding downstream 215642 33729096 ~ 33750556 (+)
LOC110525824 LOC106585069 coding downstream 242650 33756104 ~ 33766480 (+)
fahd2a LOC106585073 coding downstream 456949 33970403 ~ 33973787 (+)
G497958 NA non-coding upstream 111705 33401208 ~ 33401525 (+)
G497948 NA non-coding upstream 124811 33388179 ~ 33388419 (+)
G497946 NA non-coding upstream 126598 33385727 ~ 33386632 (+)
G497945 NA non-coding upstream 127852 33385161 ~ 33385378 (+)
G497944 NA non-coding upstream 128373 33384624 ~ 33384857 (+)
G498018 NA non-coding downstream 8867 33522321 ~ 33522610 (+)
G498174 NA non-coding downstream 264764 33778218 ~ 33779928 (+)
G498191 NA non-coding downstream 297489 33810943 ~ 33887959 (+)
c6h22orf39 cssa24h22orf39 other upstream 192882 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 348969 33135282 ~ 33165186 (+)
polk polk other upstream 584379 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 2200493 31294946 ~ 31312737 (+)
G499111 NA other downstream 637686 34151140 ~ 34151737 (+)
fancc fancc other downstream 5756505 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 6160558 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 6221330 39734703 ~ 39750180 (+)
G505988 NA other downstream 6449198 39962652 ~ 39963098 (+)

Expression


Co-expression Network