Gene
RNA
| Item | Value |
|---|---|
| gene id | G498249 |
| gene name | LOC106584951 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 33888016 ~ 33905923 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calsenilin-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU566044 | False | 771 | lncRNA | 0.43 | 2 | 33888016 | 33889734 |
| TU566045 | True | 297 | lncRNA | 0.52 | 2 | 33888016 | 33905923 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525824 | LOC106585069 | coding | upstream | 121536 | 33756104 ~ 33766480 (+) |
| LOC110525823 | LOC106585068 | coding | upstream | 138087 | 33729096 ~ 33750556 (+) |
| LOC110525821 | LOC106585065 | coding | upstream | 196805 | 33600684 ~ 33691211 (+) |
| LOC110525819 | slc25a1 | coding | upstream | 319315 | 33515250 ~ 33568701 (+) |
| LOC110525817 | LOC106585059 | coding | upstream | 379745 | 33465992 ~ 33508271 (+) |
| fahd2a | LOC106585073 | coding | downstream | 64480 | 33970403 ~ 33973787 (+) |
| LOC110525024 | NA | coding | downstream | 371302 | 34277225 ~ 34278881 (+) |
| LOC110525834 | LOC106584952 | coding | downstream | 386854 | 34292777 ~ 34298399 (+) |
| LOC110525837 | LOC106585079 | coding | downstream | 470228 | 34376151 ~ 34414688 (+) |
| LOC118964863 | NA | coding | downstream | 683620 | 34589543 ~ 34594418 (+) |
| G498191 | NA | non-coding | upstream | 57 | 33810943 ~ 33887959 (+) |
| G498174 | NA | non-coding | upstream | 108088 | 33778218 ~ 33779928 (+) |
| G498018 | NA | non-coding | upstream | 365406 | 33522321 ~ 33522610 (+) |
| G498275 | NA | non-coding | downstream | 22256 | 33928179 ~ 33928412 (+) |
| G498056 | LOC106585071 | non-coding | downstream | 42059 | 33947982 ~ 33950792 (+) |
| G498061 | NA | non-coding | downstream | 45568 | 33951491 ~ 33951884 (+) |
| G498296 | NA | non-coding | downstream | 81164 | 33987087 ~ 33987333 (+) |
| G498941 | NA | non-coding | downstream | 123298 | 34029221 ~ 34029449 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 422961 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 567668 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 723755 | 33135282 ~ 33165186 (+) |
| polk | polk | other | upstream | 959165 | 32926258 ~ 32936958 (+) |
| G495920 | LOC106584987 | other | upstream | 2575279 | 31294946 ~ 31312737 (+) |
| G499111 | NA | other | downstream | 245217 | 34151140 ~ 34151737 (+) |
| fancc | fancc | other | downstream | 5364036 | 39269915 ~ 39312098 (+) |
| LOC110525927 | smim15 | other | downstream | 5768089 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | other | downstream | 5828861 | 39734703 ~ 39750180 (+) |
| G505988 | NA | other | downstream | 6056729 | 39962652 ~ 39963098 (+) |
