G498296


Basic Information

Item Value
gene id G498296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33987087 ~ 33987333 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU566093
GAAAATGGACTGGTTGATTGAACAATAGGTGTTCCAACAACGAGCTGCAGTTTCGGAATAATTGCATCCCGTCTATTTTCCGCTGAGGCTACTTTGCAAACTGCTAGTGTCATTTAGAATTTATTAGCCTAGGCTATAACTCCctaaacatacagtggggcaaaaaagtatttagtcagccaccaattgtacaagttctcccacttaaaaagatgagaggcctgtaattttcatcataggtacactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU566093 True 247 lncRNA 0.40 1 33987087 33987333

Neighbor

gene id symbol gene type direction distance location
fahd2a LOC106585073 coding upstream 13300 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 220607 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 237158 33729096 ~ 33750556 (+)
LOC110525821 LOC106585065 coding upstream 295876 33600684 ~ 33691211 (+)
LOC110525819 slc25a1 coding upstream 418386 33515250 ~ 33568701 (+)
LOC110525024 NA coding downstream 289892 34277225 ~ 34278881 (+)
LOC110525834 LOC106584952 coding downstream 305444 34292777 ~ 34298399 (+)
LOC110525837 LOC106585079 coding downstream 388818 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 602210 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 797652 34784985 ~ 35201448 (+)
G498061 NA non-coding upstream 35203 33951491 ~ 33951884 (+)
G498056 LOC106585071 non-coding upstream 36295 33947982 ~ 33950792 (+)
G498275 NA non-coding upstream 58675 33928179 ~ 33928412 (+)
G498249 LOC106584951 non-coding upstream 81164 33888016 ~ 33905923 (+)
G498191 NA non-coding upstream 99128 33810943 ~ 33887959 (+)
G498941 NA non-coding downstream 41888 34029221 ~ 34029449 (+)
G498949 NA non-coding downstream 46384 34033717 ~ 34034011 (+)
G498991 NA non-coding downstream 77550 34064883 ~ 34065146 (+)
G499007 NA non-coding downstream 87487 34074820 ~ 34075054 (+)
G499008 NA non-coding downstream 88026 34075359 ~ 34075746 (+)
LOC110525816 LOC106585060 other upstream 522032 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 666739 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 822826 33135282 ~ 33165186 (+)
polk polk other upstream 1058236 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 2674350 31294946 ~ 31312737 (+)
G499111 NA other downstream 163807 34151140 ~ 34151737 (+)
fancc fancc other downstream 5282626 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5686679 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5747451 39734703 ~ 39750180 (+)
G505988 NA other downstream 5975319 39962652 ~ 39963098 (+)

Expression


Co-expression Network