G499011


Basic Information

Item Value
gene id G499011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34076399 ~ 34076695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU566933
aatcaaatctagagtcggctttctattccgcaacaaagcctccttcactcacgccgccaaacttaccctagtaaaacggactatcctactgatcctcgacttcggcaatgtcatctacaaaattgcttccaacactctactcagtaaactggatgcagtttatcacagtgccatccgttttgtcactaaagcaccttataccacccatcacttcgacctgtatgctctagtcggctggccctcgctacatattcgtcgccagacccactggctccaggacatctacaagtccatgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU566933 True 297 lncRNA 0.48 1 34076399 34076695

Neighbor

gene id symbol gene type direction distance location
fahd2a LOC106585073 coding upstream 102612 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 309919 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 326470 33729096 ~ 33750556 (+)
LOC110525821 LOC106585065 coding upstream 385188 33600684 ~ 33691211 (+)
LOC110525819 slc25a1 coding upstream 507698 33515250 ~ 33568701 (+)
LOC110525024 NA coding downstream 200530 34277225 ~ 34278881 (+)
LOC110525834 LOC106584952 coding downstream 216082 34292777 ~ 34298399 (+)
LOC110525837 LOC106585079 coding downstream 299456 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 512848 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 708290 34784985 ~ 35201448 (+)
G499008 NA non-coding upstream 653 34075359 ~ 34075746 (+)
G499007 NA non-coding upstream 1345 34074820 ~ 34075054 (+)
G498991 NA non-coding upstream 11253 34064883 ~ 34065146 (+)
G498949 NA non-coding upstream 42388 34033717 ~ 34034011 (+)
G498941 NA non-coding upstream 46950 34029221 ~ 34029449 (+)
G499012 NA non-coding downstream 327 34077022 ~ 34077255 (+)
G499024 NA non-coding downstream 9769 34086464 ~ 34086937 (+)
G499077 NA non-coding downstream 41824 34118519 ~ 34118808 (+)
G499079 NA non-coding downstream 42430 34119125 ~ 34119573 (+)
G499083 NA non-coding downstream 45062 34121757 ~ 34122077 (+)
LOC110525816 LOC106585060 other upstream 611344 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 756051 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 912138 33135282 ~ 33165186 (+)
polk polk other upstream 1147548 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 2763662 31294946 ~ 31312737 (+)
G499111 NA other downstream 74445 34151140 ~ 34151737 (+)
fancc fancc other downstream 5193264 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5597317 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5658089 39734703 ~ 39750180 (+)
G505988 NA other downstream 5885957 39962652 ~ 39963098 (+)

Expression


Co-expression Network