G499085


Basic Information

Item Value
gene id G499085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34122097 ~ 34122587 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU567007
tggccatgttctgttataatctacacccggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcagaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgcctgtgattattattatttgaccattctggtcatttatgaacattttaacatcttggccatgttcggttataatctccacccggcacagccagaagaggactggtcaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtacttctacacctgcattgcttgctgtttggggttttaggctgagtttctgtacagcacttttagatatcagctgatgtacgaagggctatataaatacatttgatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567007 True 491 lncRNA 0.46 1 34122097 34122587

Neighbor

gene id symbol gene type direction distance location
fahd2a LOC106585073 coding upstream 148310 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 355617 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 372168 33729096 ~ 33750556 (+)
LOC110525821 LOC106585065 coding upstream 430886 33600684 ~ 33691211 (+)
LOC110525819 slc25a1 coding upstream 553396 33515250 ~ 33568701 (+)
LOC110525024 NA coding downstream 154638 34277225 ~ 34278881 (+)
LOC110525834 LOC106584952 coding downstream 170190 34292777 ~ 34298399 (+)
LOC110525837 LOC106585079 coding downstream 253564 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 466956 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 662398 34784985 ~ 35201448 (+)
G499083 NA non-coding upstream 20 34121757 ~ 34122077 (+)
G499079 NA non-coding upstream 2524 34119125 ~ 34119573 (+)
G499077 NA non-coding upstream 3289 34118519 ~ 34118808 (+)
G499024 NA non-coding upstream 35160 34086464 ~ 34086937 (+)
G499012 NA non-coding upstream 44842 34077022 ~ 34077255 (+)
G499090 NA non-coding downstream 902 34123489 ~ 34123765 (+)
G499092 NA non-coding downstream 1793 34124380 ~ 34124640 (+)
G499112 NA non-coding downstream 29952 34152539 ~ 34152766 (+)
G499113 NA non-coding downstream 30273 34152860 ~ 34153121 (+)
G499129 NA non-coding downstream 41794 34164381 ~ 34164748 (+)
LOC110525816 LOC106585060 other upstream 657042 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 801749 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 957836 33135282 ~ 33165186 (+)
polk polk other upstream 1193246 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 2809360 31294946 ~ 31312737 (+)
G499111 NA other downstream 28553 34151140 ~ 34151737 (+)
fancc fancc other downstream 5147372 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5551425 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5612197 39734703 ~ 39750180 (+)
G505988 NA other downstream 5840065 39962652 ~ 39963098 (+)

Expression


Co-expression Network