G499112


Basic Information

Item Value
gene id G499112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34152539 ~ 34152766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU567035
gtggacttcaggaaacagcagagggaacacccccctatccacatcgattgaacagtagtggagagggtagcaagttttaagttcctcggcatacacatcacagacaaactgaattggtccactcacacagacagcattgtgaagaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaattcggcttgtcaccaaaagcactcacaaacttctacagatgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567035 True 228 lncRNA 0.49 1 34152539 34152766

Neighbor

gene id symbol gene type direction distance location
fahd2a LOC106585073 coding upstream 178752 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 386059 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 402610 33729096 ~ 33750556 (+)
LOC110525821 LOC106585065 coding upstream 461328 33600684 ~ 33691211 (+)
LOC110525819 slc25a1 coding upstream 583838 33515250 ~ 33568701 (+)
LOC110525024 NA coding downstream 124459 34277225 ~ 34278881 (+)
LOC110525834 LOC106584952 coding downstream 140011 34292777 ~ 34298399 (+)
LOC110525837 LOC106585079 coding downstream 223385 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 436777 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 632219 34784985 ~ 35201448 (+)
G499092 NA non-coding upstream 27899 34124380 ~ 34124640 (+)
G499090 NA non-coding upstream 28774 34123489 ~ 34123765 (+)
G499085 NA non-coding upstream 29952 34122097 ~ 34122587 (+)
G499083 NA non-coding upstream 30462 34121757 ~ 34122077 (+)
G499079 NA non-coding upstream 32966 34119125 ~ 34119573 (+)
G499113 NA non-coding downstream 94 34152860 ~ 34153121 (+)
G499129 NA non-coding downstream 11615 34164381 ~ 34164748 (+)
G499186 LOC106585075 non-coding downstream 97063 34249829 ~ 34251688 (+)
G499201 LOC106586052 non-coding downstream 131841 34284607 ~ 34285317 (+)
G499207 NA non-coding downstream 150487 34303253 ~ 34305108 (+)
G499111 NA other upstream 802 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 687484 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 832191 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 988278 33135282 ~ 33165186 (+)
polk polk other upstream 1223688 32926258 ~ 32936958 (+)
fancc fancc other downstream 5117193 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5521246 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5582018 39734703 ~ 39750180 (+)
G505988 NA other downstream 5809886 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 6044034 40196800 ~ 40203886 (+)

Expression


Co-expression Network