G499207


Basic Information

Item Value
gene id G499207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34303253 ~ 34305108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU567131
CGTGGATAATGTTTATTCAAAAAGTAGAGAGAATCAAGACCAGAACAGAATTTAGACTTAATTTACAATAGAACTCAAATTACATAGTTAAAACATCAAGTTATACACATCCATTTACACAACCTGTACatacatttccccccccccccccccataacattTGCAATTAATTTCAAATAACTTAAATAGTTTTCTACTTAAAAGTGCAAATCCTTACACATGGATTTGAATAAGACCATGGCAATCCGGGATGTGGAGTTCACATCTTTTCTTGTGCAatgaacaataataataacaataataatgtgTGAGTAGATAATTGTTCTCTTCCCATTAAACGTGTGTACTGGTAgaattatgtatagtatgtatgtatgcatgtaagGATGGCTGGGGCAGGCCAGTATTACAGGGGTTACATACTCTGGTTGAAAACAACAGGGTTGAGAGAGGATTCTCCAAGTCACAAGGCATGATAAGGTGAGAATGGTAGCGAATTGTTAATATTCTGACACTGTAGGGCAGACGAGAGGGTGAATCTCTACAACCCTCTCCAGGGGTAGGTAGTGGGGAACCCACACACGCTATTGGGCTATACATGCGTCTGTCTATGCATGCAGCCAATGCAAAGGAAACCGAAAAACTATCACCACAAGCAgataatatattacagtatacttcATATGTCGCCTGAGCAgtctactgttaactctactgGACAAGAAGAATTGAACTGGAACTCAGGCTGTGAAGAAAATGTAAAAAAGGTTTAGACATTACAATAAAACAAAAAAGCACAGAGACAAAACACTAAAAAGCCTCAGTCTTGTATGTTGTGGGTCAGGAGGACTGTGTTCAGTAACTGTGTGAGATTGGTCTGGTGGTGCAGGACTAAGACTTCTGCTCCGCTCCTGCAGCAGACGCGGCCGTACTCTCCGGCTTAAGGATCTGATAGGTGATGAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567131 True 966 lncRNA 0.40 2 34303253 34305108

Neighbor

gene id symbol gene type direction distance location
LOC110525834 LOC106584952 coding upstream 4854 34292777 ~ 34298399 (+)
LOC110525024 NA coding upstream 24372 34277225 ~ 34278881 (+)
fahd2a LOC106585073 coding upstream 329466 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 536773 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 553324 33729096 ~ 33750556 (+)
LOC110525837 LOC106585079 coding downstream 71043 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 284435 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 479877 34784985 ~ 35201448 (+)
LOC110525841 LOC100195666 coding downstream 929460 35234568 ~ 35245606 (+)
LOC110525843 LOC106585086 coding downstream 981958 35287066 ~ 35306444 (+)
G499201 LOC106586052 non-coding upstream 17936 34284607 ~ 34285317 (+)
G499186 LOC106585075 non-coding upstream 51565 34249829 ~ 34251688 (+)
G499129 NA non-coding upstream 138505 34164381 ~ 34164748 (+)
G499113 NA non-coding upstream 150132 34152860 ~ 34153121 (+)
G499112 NA non-coding upstream 150487 34152539 ~ 34152766 (+)
G499224 NA non-coding downstream 23774 34328882 ~ 34329085 (+)
G499225 NA non-coding downstream 24383 34329491 ~ 34329812 (+)
G499261 NA non-coding downstream 157256 34462364 ~ 34462623 (+)
G499316 NA non-coding downstream 163092 34468200 ~ 34468478 (+)
G499505 NA non-coding downstream 171644 34476752 ~ 34476987 (+)
G499111 NA other upstream 151516 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 838198 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 982905 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 1138992 33135282 ~ 33165186 (+)
polk polk other upstream 1374402 32926258 ~ 32936958 (+)
fancc fancc other downstream 4964851 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5368904 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5429676 39734703 ~ 39750180 (+)
G505988 NA other downstream 5657544 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 5891692 40196800 ~ 40203886 (+)

Expression


Co-expression Network