G499225


Basic Information

Item Value
gene id G499225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34329491 ~ 34329812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU567157
GTTGTACGTTCTTCCTCCTACCCTCATAATATCAAGCTCGGTTAAAACTCCTCCTTTCACATATCATATGCCTTTTCCACATCAaaatagacagctacaacagTCTCCTAGTTCACCTGAGCCTTCCTGACCTCTGATTCTAAGCAGAGAACTGGGTCCATAGTTCCCCCACTCTGATGTGATACTAGCTCTCCAGAATTAAGTTAACTTCGTAATCATACGTTCCATAATCTTACATACATGTGATGTTAAAGCTACTGGCAGATAGCCTGTTAGCCTTGTTAGGTCCTTCCCTGGCTTCCGgattggtaccactactgtc

Function

NR:

description
PREDICTED: uncharacterized protein LOC107721237

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567157 True 322 lncRNA 0.43 1 34329491 34329812

Neighbor

gene id symbol gene type direction distance location
LOC110525834 LOC106584952 coding upstream 31092 34292777 ~ 34298399 (+)
LOC110525024 NA coding upstream 50610 34277225 ~ 34278881 (+)
fahd2a LOC106585073 coding upstream 355704 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 563011 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 579562 33729096 ~ 33750556 (+)
LOC110525837 LOC106585079 coding downstream 46339 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 259731 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 455173 34784985 ~ 35201448 (+)
LOC110525841 LOC100195666 coding downstream 904756 35234568 ~ 35245606 (+)
LOC110525843 LOC106585086 coding downstream 957254 35287066 ~ 35306444 (+)
G499224 NA non-coding upstream 406 34328882 ~ 34329085 (+)
G499207 NA non-coding upstream 24383 34303253 ~ 34305108 (+)
G499201 LOC106586052 non-coding upstream 44174 34284607 ~ 34285317 (+)
G499186 LOC106585075 non-coding upstream 77803 34249829 ~ 34251688 (+)
G499129 NA non-coding upstream 164743 34164381 ~ 34164748 (+)
G499261 NA non-coding downstream 132552 34462364 ~ 34462623 (+)
G499316 NA non-coding downstream 138388 34468200 ~ 34468478 (+)
G499505 NA non-coding downstream 146940 34476752 ~ 34476987 (+)
G499509 NA non-coding downstream 149999 34479811 ~ 34480176 (+)
G499525 NA non-coding downstream 160203 34490015 ~ 34490230 (+)
G499111 NA other upstream 177754 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 864436 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 1009143 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 1165230 33135282 ~ 33165186 (+)
polk polk other upstream 1400640 32926258 ~ 32936958 (+)
fancc fancc other downstream 4940147 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5344200 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5404972 39734703 ~ 39750180 (+)
G505988 NA other downstream 5632840 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 5866988 40196800 ~ 40203886 (+)

Expression


Co-expression Network