G499261


Basic Information

Item Value
gene id G499261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34462364 ~ 34462623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU567193
TCATTTATAGTTATTACCGTGATGCCCAGCTTGGAATGCACGCTTCACACCTATTGTATTATATCAATGGACAATGATCATGGCCCTACAGATCATCACGGGACAATTATGCCATTGATACAGtgcagtattcagacccctttactttttcaacattttttcaacattttgtaacattacagccttgttctaaaatgtattatattgttattgtcctcatcaatctacacacagtaccccataatgacaaagcaaaaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567193 True 260 lncRNA 0.36 1 34462364 34462623

Neighbor

gene id symbol gene type direction distance location
LOC110525837 LOC106585079 coding upstream 47676 34376151 ~ 34414688 (+)
LOC110525834 LOC106584952 coding upstream 163965 34292777 ~ 34298399 (+)
LOC110525024 NA coding upstream 183483 34277225 ~ 34278881 (+)
fahd2a LOC106585073 coding upstream 488577 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 695884 33756104 ~ 33766480 (+)
LOC118964863 NA coding downstream 126920 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 322362 34784985 ~ 35201448 (+)
LOC110525841 LOC100195666 coding downstream 771945 35234568 ~ 35245606 (+)
LOC110525843 LOC106585086 coding downstream 824443 35287066 ~ 35306444 (+)
LOC110525846 LOC106585087 coding downstream 844243 35306866 ~ 35318995 (+)
G499225 NA non-coding upstream 132552 34329491 ~ 34329812 (+)
G499224 NA non-coding upstream 133279 34328882 ~ 34329085 (+)
G499207 NA non-coding upstream 157256 34303253 ~ 34305108 (+)
G499201 LOC106586052 non-coding upstream 177047 34284607 ~ 34285317 (+)
G499186 LOC106585075 non-coding upstream 210676 34249829 ~ 34251688 (+)
G499316 NA non-coding downstream 5577 34468200 ~ 34468478 (+)
G499505 NA non-coding downstream 14129 34476752 ~ 34476987 (+)
G499509 NA non-coding downstream 17188 34479811 ~ 34480176 (+)
G499525 NA non-coding downstream 27392 34490015 ~ 34490230 (+)
G499548 NA non-coding downstream 40978 34503601 ~ 34503829 (+)
G499111 NA other upstream 310627 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 997309 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 1142016 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 1298103 33135282 ~ 33165186 (+)
polk polk other upstream 1533513 32926258 ~ 32936958 (+)
fancc fancc other downstream 4807336 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5211389 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5272161 39734703 ~ 39750180 (+)
G505988 NA other downstream 5500029 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 5734177 40196800 ~ 40203886 (+)

Expression


Co-expression Network