G500285


Basic Information

Item Value
gene id G500285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35546592 ~ 35587759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU568281
CGGTGGGTAGTagcgttgggccaatgtTCTGTTTACAAAGGAGTAAAACCAGTTTacattttgggttctgattgggTAAGGCGATTGAAACTAAGCTCATAAGGAATGTAGAAGTTGTATTCAAGAATCAATTGATATACATCATGAATTTTAAAAGTGCACGAAAATGAGTGTGGCAATCACAGATTGCAACGGCAACTTCCTGAGTAAGAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU568281 True 216 lncRNA 0.39 2 35546592 35587759

Neighbor

gene id symbol gene type direction distance location
LOC110526892 NA coding upstream 110787 35429521 ~ 35435805 (+)
LOC110525848 zdhhc8 coding upstream 131556 35334881 ~ 35415036 (+)
LOC110525846 LOC106585087 coding upstream 227597 35306866 ~ 35318995 (+)
LOC110525843 LOC106585086 coding upstream 240148 35287066 ~ 35306444 (+)
LOC110525841 LOC100195666 coding upstream 300986 35234568 ~ 35245606 (+)
txnrd2.2 txnrd2 coding downstream 155989 35743748 ~ 35767946 (+)
gnb1l gnb1l coding downstream 199286 35787045 ~ 35815869 (+)
LOC110525856 LOC106585097 coding downstream 481009 36068768 ~ 36124738 (+)
LOC110525857 LOC106585098 coding downstream 539286 36127045 ~ 36140318 (+)
LOC110525858 LOC106585100 coding downstream 572512 36160271 ~ 36198750 (+)
G500225 dgcr8 non-coding upstream 104393 35441415 ~ 35442199 (+)
G500220 ranbp1 non-coding upstream 117223 35423381 ~ 35429369 (+)
G500127 NA non-coding upstream 126568 35418917 ~ 35420024 (+)
G500126 NA non-coding upstream 128111 35417127 ~ 35418481 (+)
G500121 NA non-coding upstream 129584 35416308 ~ 35417008 (+)
G501145 NA non-coding downstream 183856 35771615 ~ 35771817 (+)
G501151 NA non-coding downstream 228847 35816606 ~ 35818595 (+)
G501182 NA non-coding downstream 265877 35853636 ~ 35925266 (+)
G501325 NA non-coding downstream 359517 35947276 ~ 35947476 (+)
G501353 NA non-coding downstream 392464 35980223 ~ 35980435 (+)
G499111 NA other upstream 1394855 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 2081537 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 2226244 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 2382331 33135282 ~ 33165186 (+)
polk polk other upstream 2617741 32926258 ~ 32936958 (+)
fancc fancc other downstream 3682200 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 4086253 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 4147025 39734703 ~ 39750180 (+)
G505988 NA other downstream 4374893 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 4609041 40196800 ~ 40203886 (+)

Expression


Co-expression Network