G501151


Basic Information

Item Value
gene id G501151
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35816606 ~ 35818595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU569215
CGGACGCACAATAGAACCCTGCCTCAGTCAGTTATCACCTAGCGTGTCTACCATGGCCTTGGAGGTCAAGGGTCAGCGGGCCATTGTGATTTTGAATATTTTCTTTCAGTTCAGTCGAGTATTTAGCTTAGCCTAGGCCTCTGCTCTGCTATTACAGCACAGGTTGTAATATACCTTGATGTATTGAATGGTGGGTTGGATTACTGGGTGATGACATGAGACAAACTGACCATGAATGTTTATAAAATAGAAATGAATAGGAATATGATGGTAAGAAAATAGTTCTGAGAGCGGTTAAAATGCCATGCTTTGCAGGCAGAGTCATCTTTGTTTGTCGTCTGCACACTAATATGAATGCATCAcggttgtttctctctctctttcttgtggtGTTTTTTATATTCAGCATAAAATGTCCATCAGCGTTGGCAAATGGAACAAACTGTAGTTCCTTCACTCGCTTTGGGAAAATGTGAAACActtgctctgctctctctgcatAACTTTTAGGTAAACGACTCCTGTAGGTCTACCTCGGCTTGTTTTTAATATCTGTCCACAGATATGCCAAGCTGCCGGGGTGTGGCAGGGGAGATGTACACAAAGGTGAAACAATCGGAGCACAGCTCTGATAGGCTTGTCACAACAGATGGGCCAGATGCAGATGAGTGTCAAATGATGCCTCTGGTTGCATTATCATTCATTCTCCTGAGTCTGTCCTCATATGGCAAGCATGTGGCATCCTATCTTATTTGGAGCTGAAGACATATGTGTGCGTAGCTAGGCTGTACAGAAATACCAAAGATTTCACTCAAGTCTTATTTTTCTGTCTGATTGGAGTATGTTTTTCCACAGGCGGCTCAGCCTGAGACATGCCCACTCAACTTTTTAAAGCATTAGGTTAGTAGTGGGGAAACACAGGAATTAATGTCAGTATTTAGGCCTACCTGAGCTGAATGTGCAGCAAAAATGAACAGTCATGGCCTTATGTCTAAAATGTAGCCTATGTATCACAGAtcattgtgaagcatttattatggtgaatataaacgcaacatgtaaagtgttggtctcatgtttcattaagtggaaagaaaaaaaaaatccccaaaattgtccatatgcacaaatagctctcaaatttggtgcacccatttgttttacatccctgttagtgagcgtttttcctttgccaagaaaatccatccacctgacagatgtggcatatcaagaagctgataaaacatgctcattacacaggtgcaccttgtgctggggacaataaaaagccactcgcTCTAAAATATgtggttttgtcacacaataatgccacagatgtcttgaGAAAGtgtggcatgctgactgcaggaatgtccatcataGCTGTTGCCctagaatttaatgttaatttctctaccataagccgcctccaacgtcgtttaaGATAATTTGGCATTATgtccaaacggcctcacaaccgcagaccatgtctatggcgttgtgtgggccaGCAGTttgctatggacaatgaacacaattgcattttatcaatgtaaatttaggcccattgtcgtgtcatTCTTCTGCTGCCATTATCTcgcgtttcagcatgataatgcgcgGCCCCgtgtctcaaggatctgtacacaattcctggaagctgaaaatgtcccagttcttccatggcctgcatactcagcagacatgtcacccattgagcatatttgggatgctctggatcgacgtgtacaaccgCAAGTTCCAGTTCCAGGAGATGTGAagaagatgtgtcacgctgcatgaggcaaatagtggtcacaccagatactgactgattttctgatccacgcctctacttttttattttttttaaggtatctgttatcaacatattcccagtcatgttaaatccatagattagggcctaatttatgtattttaattgactgatttcctgatatgacctgtaactcagtaaaatctttgaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU569215 True 1990 lncRNA 0.42 1 35816606 35818595

Neighbor

gene id symbol gene type direction distance location
gnb1l gnb1l coding upstream 737 35787045 ~ 35815869 (+)
txnrd2.2 txnrd2 coding upstream 48660 35743748 ~ 35767946 (+)
LOC110525852 arvcf coding upstream 76566 35506440 ~ 35740040 (+)
LOC110526892 NA coding upstream 380801 35429521 ~ 35435805 (+)
LOC110525848 zdhhc8 coding upstream 401570 35334881 ~ 35415036 (+)
LOC110525856 LOC106585097 coding downstream 250173 36068768 ~ 36124738 (+)
LOC110525857 LOC106585098 coding downstream 308450 36127045 ~ 36140318 (+)
LOC110525858 LOC106585100 coding downstream 341676 36160271 ~ 36198750 (+)
LOC110525861 LOC106585102 coding downstream 385297 36203892 ~ 36213876 (+)
LOC110525859 LOC106585101 coding downstream 395308 36213903 ~ 36274948 (+)
G501145 NA non-coding upstream 44789 35771615 ~ 35771817 (+)
G500285 NA non-coding upstream 228847 35546592 ~ 35587759 (+)
G500225 dgcr8 non-coding upstream 374407 35441415 ~ 35442199 (+)
G500220 ranbp1 non-coding upstream 387237 35423381 ~ 35429369 (+)
G500127 NA non-coding upstream 396582 35418917 ~ 35420024 (+)
G501182 NA non-coding downstream 35041 35853636 ~ 35925266 (+)
G501325 NA non-coding downstream 128681 35947276 ~ 35947476 (+)
G501353 NA non-coding downstream 161628 35980223 ~ 35980435 (+)
G501357 NA non-coding downstream 163723 35982318 ~ 35982550 (+)
G501362 NA non-coding downstream 170367 35988962 ~ 35989243 (+)
G499111 NA other upstream 1664869 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 2351551 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 2496258 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 2652345 33135282 ~ 33165186 (+)
polk polk other upstream 2887755 32926258 ~ 32936958 (+)
fancc fancc other downstream 3451364 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 3855417 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 3916189 39734703 ~ 39750180 (+)
G505988 NA other downstream 4144057 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 4378205 40196800 ~ 40203886 (+)

Expression


Co-expression Network