G501325



Basic Information


Item Value
gene id G501325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35947276 ~ 35947476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU569404
GCAGAGTAGAGAAGTTGAAAACAGTTAACAGTGTTAGAGGTCTTTAGATTTAAGGCCCTCCAAGGATCTGCTGGTGGTGATTATTTGATTACCACCAATCTGATAGTCCTGGAGATGTAGAATAATGTGATAAGGAAGCCCTGTGATTTCCTGTTAGTGTCAGGGTCCATGATGGATTGATAATGTCACACTAGGATACac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU569404 True 201 lncRNA 0.41 1 35947276 35947476

Neighbor


gene id symbol gene type direction distance location
gnb1l gnb1l coding upstream 131407 35787045 ~ 35815869 (+)
txnrd2.2 txnrd2 coding upstream 179330 35743748 ~ 35767946 (+)
LOC110525852 arvcf coding upstream 207236 35506440 ~ 35740040 (+)
LOC110526892 NA coding upstream 511471 35429521 ~ 35435805 (+)
LOC110525848 zdhhc8 coding upstream 532240 35334881 ~ 35415036 (+)
LOC110525856 LOC106585097 coding downstream 121292 36068768 ~ 36124738 (+)
LOC110525857 LOC106585098 coding downstream 179569 36127045 ~ 36140318 (+)
LOC110525858 LOC106585100 coding downstream 212795 36160271 ~ 36198750 (+)
LOC110525861 LOC106585102 coding downstream 256416 36203892 ~ 36213876 (+)
LOC110525859 LOC106585101 coding downstream 266427 36213903 ~ 36274948 (+)
G501182 NA non-coding upstream 22010 35853636 ~ 35925266 (+)
G501151 NA non-coding upstream 128681 35816606 ~ 35818595 (+)
G501145 NA non-coding upstream 175459 35771615 ~ 35771817 (+)
G500285 NA non-coding upstream 359517 35546592 ~ 35587759 (+)
G500225 dgcr8 non-coding upstream 505077 35441415 ~ 35442199 (+)
G501353 NA non-coding downstream 32747 35980223 ~ 35980435 (+)
G501357 NA non-coding downstream 34842 35982318 ~ 35982550 (+)
G501362 NA non-coding downstream 41486 35988962 ~ 35989243 (+)
G501368 NA non-coding downstream 45887 35993363 ~ 35993602 (+)
G501373 NA non-coding downstream 48575 35996051 ~ 36038946 (+)
G499111 NA other upstream 1795539 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 2482221 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 2626928 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 2783015 33135282 ~ 33165186 (+)
polk polk other upstream 3018425 32926258 ~ 32936958 (+)
fancc fancc other downstream 3322483 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 3726536 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 3787308 39734703 ~ 39750180 (+)
G505988 NA other downstream 4015176 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 4249324 40196800 ~ 40203886 (+)

Expression



Co-expression Network