G501490


Basic Information

Item Value
gene id G501490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 36223306 ~ 36223643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU569590
AGTATCACACATATCTCCAATCTTGTAAATCAGTCGTTCAGCCTATTTAAAAGGAGAAAGGTAGTCACCGTGcagtttggtatcattgtgtgcaccacactgaacatggaccagagaaaGCAAAGGAGGAGATCAGAAAGGAAATCATAGACAAGCATGGTAAAGGTAAAGGCTACAAGACCATCTCCAAGCAGCTTGATATCACTGTGACAACAGTTGCAAATATTATTAGGAAGTTTAAGGTTCATGGAACTGTAGCCAACCTCCCTGGGAGCGGCCACAAAAGGAAAATCAACCCCGGATTGAACAGAAGGAGAGTGCGAATGGTAGAAAAAGAA

Function

NR:

description
hypothetical protein EH28_15688

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU569590 True 338 lncRNA 0.43 1 36223306 36223643

Neighbor

gene id symbol gene type direction distance location
LOC110525861 LOC106585102 coding upstream 9430 36203892 ~ 36213876 (+)
LOC110525858 LOC106585100 coding upstream 24556 36160271 ~ 36198750 (+)
LOC110525857 LOC106585098 coding upstream 82988 36127045 ~ 36140318 (+)
LOC110525856 LOC106585097 coding upstream 99337 36068768 ~ 36124738 (+)
gnb1l gnb1l coding upstream 407437 35787045 ~ 35815869 (+)
LOC110525862 LOC106580494 coding downstream 247451 36471094 ~ 36479116 (+)
LOC110525864 addb coding downstream 364729 36588372 ~ 36613879 (+)
LOC110525865 NA coding downstream 392232 36615875 ~ 36618390 (+)
LOC110525866 LOC106585105 coding downstream 396077 36581096 ~ 36644654 (+)
LOC110525867 LOC106585106 coding downstream 430806 36654449 ~ 36661321 (+)
G501492 NA non-coding upstream 1341 36221787 ~ 36221965 (+)
G501485 LOC100194703 non-coding upstream 22794 36200161 ~ 36200512 (+)
G501446 NA non-coding upstream 121405 36101301 ~ 36101901 (+)
G501491 NA non-coding downstream 390 36224033 ~ 36224611 (+)
G501891 NA non-coding downstream 257580 36481223 ~ 36481498 (+)
G501896 NA non-coding downstream 262619 36486262 ~ 36486582 (+)
G501894 NA non-coding downstream 265135 36488778 ~ 36488962 (+)
G499111 NA other upstream 2071569 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 2758251 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 2902958 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 3059045 33135282 ~ 33165186 (+)
polk polk other upstream 3294455 32926258 ~ 32936958 (+)
fancc fancc other downstream 3046316 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 3450369 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 3511141 39734703 ~ 39750180 (+)
G505988 NA other downstream 3739009 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 3973157 40196800 ~ 40203886 (+)

Expression


Co-expression Network