G501896


Basic Information

Item Value
gene id G501896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 36486262 ~ 36486582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU570021
TGCCATAGCCACGGGAGGTAGGGTTGCTGACCTGAGAAATCTGAATTTAAACGTTTTTTTCtacacaaaagtagtgcattggGCTTTTAGTGTTAGTGGACAGATGTCTGTAGCACAGGTACACATTTTTTCCCCCAGCATCTCCACTTTGGAGAGTTGTTTAATAAAGAATTGTACCTTTCAGGATTCAATAGTTGTAGTTATAAGAGTTGTTGCCCTGTCCCATTCTCTGTGATTTTTATTCCAATGGAATCCAgtaaagaacaaaaccctgtcctcaaAATGCTCAAGGTTAGGGGCAGACAAAATGAAATATTTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU570021 True 321 lncRNA 0.39 1 36486262 36486582

Neighbor

gene id symbol gene type direction distance location
LOC110525862 LOC106580494 coding upstream 7146 36471094 ~ 36479116 (+)
LOC110525859 LOC106585101 coding upstream 211314 36213903 ~ 36274948 (+)
LOC110525861 LOC106585102 coding upstream 272386 36203892 ~ 36213876 (+)
LOC110525858 LOC106585100 coding upstream 287512 36160271 ~ 36198750 (+)
LOC110525857 LOC106585098 coding upstream 345944 36127045 ~ 36140318 (+)
LOC110525864 addb coding downstream 101790 36588372 ~ 36613879 (+)
LOC110525865 NA coding downstream 129293 36615875 ~ 36618390 (+)
LOC110525866 LOC106585105 coding downstream 133138 36581096 ~ 36644654 (+)
LOC110525867 LOC106585106 coding downstream 167867 36654449 ~ 36661321 (+)
LOC110525868 LOC106585108 coding downstream 185072 36671654 ~ 36693673 (+)
G501891 NA non-coding upstream 4764 36481223 ~ 36481498 (+)
G501491 NA non-coding upstream 261651 36224033 ~ 36224611 (+)
G501490 NA non-coding upstream 262619 36223306 ~ 36223643 (+)
G501492 NA non-coding upstream 264297 36221787 ~ 36221965 (+)
G501894 NA non-coding downstream 2196 36488778 ~ 36488962 (+)
G501903 NA non-coding downstream 10244 36496826 ~ 36497052 (+)
G501908 NA non-coding downstream 15480 36502062 ~ 36502342 (+)
G501915 LOC106585103 non-coding downstream 29978 36516560 ~ 36519933 (+)
G499111 NA other upstream 2334525 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 3021207 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 3165914 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 3322001 33135282 ~ 33165186 (+)
polk polk other upstream 3557411 32926258 ~ 32936958 (+)
fancc fancc other downstream 2783377 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 3187430 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 3248202 39734703 ~ 39750180 (+)
G505988 NA other downstream 3476070 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 3710218 40196800 ~ 40203886 (+)

Expression


Co-expression Network