Gene
RNA
| Item | Value |
|---|---|
| gene id | G503011 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 37112403 ~ 37112708 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU571234 | True | 306 | lncRNA | 0.32 | 1 | 37112403 | 37112708 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525880 | casp3 | coding | downstream | 9409 | 37097779 ~ 37102994 (-) |
| ncaph | LOC106585119 | coding | downstream | 34688 | 37068792 ~ 37077715 (-) |
| vamp8 | LOC106585118 | coding | downstream | 47373 | 37050701 ~ 37065030 (-) |
| vamp5 | LOC106585117 | coding | downstream | 65126 | 37037439 ~ 37047277 (-) |
| trnag-ccc-2 | NA | coding | downstream | 124308 | 36988025 ~ 36988095 (-) |
| LOC110525881 | LOC106585120 | coding | upstream | 47671 | 37160379 ~ 37193152 (-) |
| ogfod2 | ogfod2 | coding | upstream | 227997 | 37340705 ~ 37344084 (-) |
| LOC110525887 | LOC106585127 | coding | upstream | 356050 | 37468758 ~ 37482116 (-) |
| zmat4a | zmat4 | coding | upstream | 516087 | 37628795 ~ 37778250 (-) |
| sfrp1a | LOC106585130 | coding | upstream | 712346 | 37825054 ~ 37842809 (-) |
| G503009 | NA | non-coding | downstream | 1314 | 37110877 ~ 37111089 (-) |
| G502610 | NA | non-coding | downstream | 9066 | 37103006 ~ 37103337 (-) |
| G502598 | NA | non-coding | downstream | 21281 | 37090863 ~ 37091122 (-) |
| G502593 | NA | non-coding | downstream | 28167 | 37083919 ~ 37084236 (-) |
| G502591 | NA | non-coding | downstream | 32781 | 37079418 ~ 37079622 (-) |
| G503065 | NA | non-coding | upstream | 126483 | 37239191 ~ 37239488 (-) |
| G503063 | NA | non-coding | upstream | 128370 | 37241078 ~ 37241193 (-) |
| G503108 | NA | non-coding | upstream | 142142 | 37254850 ~ 37255220 (-) |
| G503110 | NA | non-coding | upstream | 147821 | 37260529 ~ 37260888 (-) |
| G503112 | NA | non-coding | upstream | 150113 | 37262821 ~ 37263127 (-) |
| hk2 | LOC106585103 | other | downstream | 595135 | 36507843 ~ 36569143 (-) |
| G501142 | NA | other | downstream | 1344474 | 35765366 ~ 35767929 (-) |
| G498960 | NA | other | downstream | 3071229 | 34040359 ~ 34041174 (-) |
| LOC110525812 | LOC103397138 | other | downstream | 3775623 | 33332650 ~ 33336818 (-) |
| G503064 | NA | other | upstream | 127136 | 37239844 ~ 37240937 (-) |
| G503159 | LOC106580514 | other | upstream | 218776 | 37331484 ~ 37336552 (-) |
| nsmfb | nsmf | other | upstream | 1842162 | 38926899 ~ 38967540 (-) |
| G505472 | NA | other | upstream | 2093170 | 39205878 ~ 39206269 (-) |
| G505493 | ptch1 | other | upstream | 2119985 | 39232693 ~ 39233210 (-) |
