G503239


Basic Information

Item Value
gene id G503239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 37434694 ~ 37538914 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU571487
tcttccatttaagaatgatggaggccactgtgttctcttcaatgctgcagaaatgttttggtacccttccctagatctttgcctcgacacaatcctgtctcggagctctacggacaattccttcGACATTTTTgggaacccttccccagatctgtgcctcaacacaatcctgtctctgagctctacggacaattccttcgacctctggcatgcactgtcaattgtaggaccttatatagacaggtgtgtgcctgtccaatcaattgaaatttaccacagatggactccaatcaagttgtaaaaacatcaaggatgatcaaGATACTAGGGTAGTGAATTGATGTTAGCTTCAGCTATATGCAAGCAAGGAAAGTTAGCCTACAAAGCTGGATGCTACCTGTATCTTCTTGCATTAAGTGTTCTAGCCTGTAATGGATATGCTTGTGTGAACAGTAATTCCGTAATTAAAAAGAAAATAACTAAAAACACAGCGTTACATTATGCTGCagttaacacacttgaataaGTGTTGAATGTGAatcagcccagactcccagtgagtGCAGTGGTTCATCAGGACAGGCTAGAGCTAGCAACGACTAAGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU571487 True 607 lncRNA 0.43 3 37434694 37538914

Neighbor

gene id symbol gene type direction distance location
ogfod2 ogfod2 coding downstream 90610 37340705 ~ 37344084 (-)
LOC110525881 LOC106585120 coding downstream 241542 37160379 ~ 37193152 (-)
LOC110525880 casp3 coding downstream 331700 37097779 ~ 37102994 (-)
ncaph LOC106585119 coding downstream 356979 37068792 ~ 37077715 (-)
vamp8 LOC106585118 coding downstream 369664 37050701 ~ 37065030 (-)
zmat4a zmat4 coding upstream 89881 37628795 ~ 37778250 (-)
sfrp1a LOC106585130 coding upstream 286140 37825054 ~ 37842809 (-)
loxl2b LOC106585132 coding upstream 377516 37916430 ~ 37996902 (-)
hdr LOC106584955 coding upstream 472417 38011331 ~ 38018136 (-)
LOC110525897 LOC106585133 coding upstream 485104 38024018 ~ 38235017 (-)
G503195 NA non-coding downstream 47593 37386901 ~ 37387101 (-)
G503178 NA non-coding downstream 72635 37361031 ~ 37362059 (-)
G503159 LOC106580514 non-coding downstream 102824 37331484 ~ 37336552 (-)
G503114 NA non-coding downstream 167315 37267167 ~ 37267379 (-)
G503113 NA non-coding downstream 170317 37264167 ~ 37264377 (-)
G503311 NA non-coding upstream 3950 37542864 ~ 37543074 (-)
G503316 NA non-coding upstream 9742 37548656 ~ 37548926 (-)
G503320 NA non-coding upstream 12659 37551573 ~ 37551825 (-)
G503321 NA non-coding upstream 14317 37553231 ~ 37553592 (-)
G503327 NA non-coding upstream 22923 37561837 ~ 37562101 (-)
G503064 NA other downstream 193757 37239844 ~ 37240937 (-)
hk2 LOC106585103 other downstream 917426 36507843 ~ 36569143 (-)
G501142 NA other downstream 1666765 35765366 ~ 35767929 (-)
nsmfb nsmf other upstream 1415956 38926899 ~ 38967540 (-)
G505472 NA other upstream 1666964 39205878 ~ 39206269 (-)
G505493 ptch1 other upstream 1693779 39232693 ~ 39233210 (-)
aopep cssa24h9orf3 other upstream 1882754 39313471 ~ 39434971 (-)
G506641 NA other upstream 2084771 39623685 ~ 39624344 (-)

Expression


Co-expression Network