Gene
RNA
| Item | Value |
|---|---|
| gene id | G503311 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 37542864 ~ 37543074 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU571563 | True | 211 | lncRNA | 0.37 | 1 | 37542864 | 37543074 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525887 | LOC106585127 | coding | downstream | 60748 | 37468758 ~ 37482116 (-) |
| ogfod2 | ogfod2 | coding | downstream | 198780 | 37340705 ~ 37344084 (-) |
| LOC110525881 | LOC106585120 | coding | downstream | 349712 | 37160379 ~ 37193152 (-) |
| LOC110525880 | casp3 | coding | downstream | 439870 | 37097779 ~ 37102994 (-) |
| ncaph | LOC106585119 | coding | downstream | 465149 | 37068792 ~ 37077715 (-) |
| zmat4a | zmat4 | coding | upstream | 85721 | 37628795 ~ 37778250 (-) |
| sfrp1a | LOC106585130 | coding | upstream | 281980 | 37825054 ~ 37842809 (-) |
| loxl2b | LOC106585132 | coding | upstream | 373356 | 37916430 ~ 37996902 (-) |
| hdr | LOC106584955 | coding | upstream | 468257 | 38011331 ~ 38018136 (-) |
| LOC110525897 | LOC106585133 | coding | upstream | 480944 | 38024018 ~ 38235017 (-) |
| G503239 | NA | non-coding | downstream | 3950 | 37434694 ~ 37538914 (-) |
| G503195 | NA | non-coding | downstream | 155763 | 37386901 ~ 37387101 (-) |
| G503178 | NA | non-coding | downstream | 180805 | 37361031 ~ 37362059 (-) |
| G503159 | LOC106580514 | non-coding | downstream | 210994 | 37331484 ~ 37336552 (-) |
| G503114 | NA | non-coding | downstream | 275485 | 37267167 ~ 37267379 (-) |
| G503316 | NA | non-coding | upstream | 5582 | 37548656 ~ 37548926 (-) |
| G503320 | NA | non-coding | upstream | 8499 | 37551573 ~ 37551825 (-) |
| G503321 | NA | non-coding | upstream | 10157 | 37553231 ~ 37553592 (-) |
| G503327 | NA | non-coding | upstream | 18763 | 37561837 ~ 37562101 (-) |
| G503329 | NA | non-coding | upstream | 23161 | 37566235 ~ 37566500 (-) |
| G503064 | NA | other | downstream | 301927 | 37239844 ~ 37240937 (-) |
| vamp8 | LOC106585118 | other | downstream | 477875 | 37050701 ~ 37065030 (-) |
| hk2 | LOC106585103 | other | downstream | 1025596 | 36507843 ~ 36569143 (-) |
| G501142 | NA | other | downstream | 1774935 | 35765366 ~ 35767929 (-) |
| nsmfb | nsmf | other | upstream | 1411796 | 38926899 ~ 38967540 (-) |
| G505472 | NA | other | upstream | 1662804 | 39205878 ~ 39206269 (-) |
| G505493 | ptch1 | other | upstream | 1689619 | 39232693 ~ 39233210 (-) |
| aopep | cssa24h9orf3 | other | upstream | 1878594 | 39313471 ~ 39434971 (-) |
| G506641 | NA | other | upstream | 2080611 | 39623685 ~ 39624344 (-) |
