G504126


Basic Information

Item Value
gene id G504126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 38671306 ~ 38671690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU572429
tgttggttaaattgtcattttaatgaatggagcgaATTTGGAGCTGCAGTTTTTTTTTCCTGCGAGAGCAGAACGGTTTTTAGCGGCTCTGTTGGAAAGGACATGCTCCATGAATGTTGAGTAGGATTGCTCAACTCAGCTCATAGGCTATTCACCCGGGGCACCGAGAccttcttacatctgctgatatctcaatgtgctttacagaaacccagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU572429 True 217 lncRNA 0.45 2 38671306 38671690

Neighbor

gene id symbol gene type direction distance location
LOC110525907 NA coding upstream 4806 38664668 ~ 38666501 (+)
si:ch211-102c2.4 LOC106585141 coding upstream 33310 38629046 ~ 38637996 (+)
cd53 cd53 coding upstream 80942 38584458 ~ 38590364 (+)
LOC110525902 LOC106585137 coding upstream 88405 38566569 ~ 38582901 (+)
lman2lb LOC106585136 coding upstream 109025 38556641 ~ 38562281 (+)
LOC110525909 LOC100380751 coding downstream 74964 38746654 ~ 38857447 (+)
b3galt8 LOC106585144 coding downstream 186319 38858009 ~ 38860997 (+)
zgc:162952 LOC100195200 coding downstream 193904 38865594 ~ 38892231 (+)
LOC110525918 LOC106585148 coding downstream 361972 39033662 ~ 39035194 (+)
hsd17b3 hsd17b3 coding downstream 370468 39042158 ~ 39068390 (+)
G503936 NA non-coding upstream 323619 38347186 ~ 38347687 (+)
G503757 NA non-coding upstream 573816 38090805 ~ 38097490 (+)
G503629 LOC106585132 non-coding upstream 749752 37916220 ~ 37921554 (+)
G503598 NA non-coding upstream 762280 37907355 ~ 37909026 (+)
G504715 NA non-coding downstream 98777 38770467 ~ 38770724 (+)
G504719 NA non-coding downstream 102783 38774473 ~ 38774817 (+)
G504732 NA non-coding downstream 122870 38794560 ~ 38794883 (+)
G504733 NA non-coding downstream 123453 38795143 ~ 38795407 (+)
G504739 NA non-coding downstream 132506 38804196 ~ 38804424 (+)
G499111 NA other upstream 4519569 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 5206251 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 5350958 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 5507045 33135282 ~ 33165186 (+)
polk polk other upstream 5742455 32926258 ~ 32936958 (+)
fancc fancc other downstream 598269 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 1002322 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 1063094 39734703 ~ 39750180 (+)
G505988 NA other downstream 1290962 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 1525110 40196800 ~ 40203886 (+)

Expression


Co-expression Network