Gene
RNA
| Item | Value |
|---|---|
| gene id | G504739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 38804196 ~ 38804424 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573080 | True | 229 | lncRNA | 0.43 | 1 | 38804196 | 38804424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| traf2a | LOC106585142 | coding | upstream | 120593 | 38668479 ~ 38683603 (+) |
| LOC110525907 | NA | coding | upstream | 137696 | 38664668 ~ 38666501 (+) |
| si:ch211-102c2.4 | LOC106585141 | coding | upstream | 166200 | 38629046 ~ 38637996 (+) |
| cd53 | cd53 | coding | upstream | 213832 | 38584458 ~ 38590364 (+) |
| LOC110525902 | LOC106585137 | coding | upstream | 221295 | 38566569 ~ 38582901 (+) |
| b3galt8 | LOC106585144 | coding | downstream | 53585 | 38858009 ~ 38860997 (+) |
| zgc:162952 | LOC100195200 | coding | downstream | 61170 | 38865594 ~ 38892231 (+) |
| LOC110525918 | LOC106585148 | coding | downstream | 229238 | 39033662 ~ 39035194 (+) |
| hsd17b3 | hsd17b3 | coding | downstream | 237734 | 39042158 ~ 39068390 (+) |
| ptch1 | ptch1 | coding | downstream | 351052 | 39155476 ~ 39234874 (+) |
| G504733 | NA | non-coding | upstream | 8789 | 38795143 ~ 38795407 (+) |
| G504732 | NA | non-coding | upstream | 9313 | 38794560 ~ 38794883 (+) |
| G504719 | NA | non-coding | upstream | 29379 | 38774473 ~ 38774817 (+) |
| G504715 | NA | non-coding | upstream | 33472 | 38770467 ~ 38770724 (+) |
| G504742 | NA | non-coding | downstream | 2199 | 38806623 ~ 38807042 (+) |
| G504794 | NA | non-coding | downstream | 100708 | 38905132 ~ 38910062 (+) |
| G504796 | NA | non-coding | downstream | 106811 | 38911235 ~ 38911457 (+) |
| G504798 | NA | non-coding | downstream | 108904 | 38913328 ~ 38913616 (+) |
| G504865 | NA | non-coding | downstream | 222566 | 39026990 ~ 39027474 (+) |
| G499111 | NA | other | upstream | 4652459 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 5339141 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 5483848 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 5639935 | 33135282 ~ 33165186 (+) |
| polk | polk | other | upstream | 5875345 | 32926258 ~ 32936958 (+) |
| fancc | fancc | other | downstream | 465535 | 39269915 ~ 39312098 (+) |
| LOC110525927 | smim15 | other | downstream | 869588 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | other | downstream | 930360 | 39734703 ~ 39750180 (+) |
| G505988 | NA | other | downstream | 1158228 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 1392376 | 40196800 ~ 40203886 (+) |
