Gene
RNA
| Item | Value |
|---|---|
| gene id | G505050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 38900124 ~ 38900361 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: homeodomain-interacting protein kinase 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573432 | True | 238 | lncRNA | 0.44 | 1 | 38900124 | 38900361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rabl6b | LOC106585139 | coding | downstream | 235499 | 38635426 ~ 38664625 (-) |
| LOC110525905 | LOC106585140 | coding | downstream | 273969 | 38621959 ~ 38626155 (-) |
| araf | LOC106585138 | coding | downstream | 280263 | 38590907 ~ 38619861 (-) |
| tbx3b | LOC106584937 | coding | downstream | 368912 | 38526426 ~ 38531212 (-) |
| tm2d2 | NA | coding | downstream | 379284 | 38498656 ~ 38520840 (-) |
| nsmfb | nsmf | coding | upstream | 26538 | 38926899 ~ 38967540 (-) |
| LOC110525916 | ccdc183 | coding | upstream | 104850 | 39005211 ~ 39015501 (-) |
| pnpla7b | LOC106585146 | coding | upstream | 116331 | 39016692 ~ 39033431 (-) |
| ercc6l2 | ercc6l2 | coding | upstream | 189870 | 39090231 ~ 39106621 (-) |
| aopep | cssa24h9orf3 | coding | upstream | 413110 | 39313471 ~ 39434971 (-) |
| G505019 | NA | non-coding | downstream | 42679 | 38855456 ~ 38857445 (-) |
| G504975 | NA | non-coding | downstream | 124861 | 38774958 ~ 38775263 (-) |
| G504974 | NA | non-coding | downstream | 125626 | 38774056 ~ 38774498 (-) |
| G504971 | NA | non-coding | downstream | 130116 | 38769767 ~ 38770008 (-) |
| G504658 | NA | non-coding | downstream | 216547 | 38680103 ~ 38683577 (-) |
| G505053 | NA | non-coding | upstream | 4300 | 38904661 ~ 38904862 (-) |
| G505069 | NA | non-coding | upstream | 23860 | 38924221 ~ 38924457 (-) |
| G505070 | NA | non-coding | upstream | 24201 | 38924562 ~ 38924811 (-) |
| G505102 | NA | non-coding | upstream | 76672 | 38977033 ~ 38977364 (-) |
| G505429 | NA | non-coding | upstream | 240324 | 39140685 ~ 39140930 (-) |
| G503159 | LOC106580514 | other | downstream | 1563572 | 37331484 ~ 37336552 (-) |
| G503064 | NA | other | downstream | 1659187 | 37239844 ~ 37240937 (-) |
| vamp8 | LOC106585118 | other | downstream | 1835135 | 37050701 ~ 37065030 (-) |
| hk2 | LOC106585103 | other | downstream | 2382856 | 36507843 ~ 36569143 (-) |
| G501142 | NA | other | downstream | 3132195 | 35765366 ~ 35767929 (-) |
| G505472 | NA | other | upstream | 305517 | 39205878 ~ 39206269 (-) |
| G505493 | ptch1 | other | upstream | 332332 | 39232693 ~ 39233210 (-) |
| G506641 | NA | other | upstream | 723324 | 39623685 ~ 39624344 (-) |
