G504798


Basic Information

Item Value
gene id G504798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 38913328 ~ 38913616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU573147
gaggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacttctgtcattgccaacaaagggtatataacaaagtattgaaataaacttttgttattgaccaactacttattttccaccataatttgcaaataaattcataaaaaatcctacaatgtgattttctggattttttttcttctgtacaTTGAGTCGGGAGCAGGGTGCTTGTTATTTGTCAATTGGCCCAGTGGTACTGCAATgacttctgattggtcaaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU573147 True 289 lncRNA 0.36 1 38913328 38913616

Neighbor

gene id symbol gene type direction distance location
zgc:162952 LOC100195200 coding upstream 21097 38865594 ~ 38892231 (+)
b3galt8 LOC106585144 coding upstream 52331 38858009 ~ 38860997 (+)
LOC110525909 LOC100380751 coding upstream 55881 38746654 ~ 38857447 (+)
traf2a LOC106585142 coding upstream 229725 38668479 ~ 38683603 (+)
LOC110525907 NA coding upstream 246828 38664668 ~ 38666501 (+)
LOC110525918 LOC106585148 coding downstream 120046 39033662 ~ 39035194 (+)
hsd17b3 hsd17b3 coding downstream 128542 39042158 ~ 39068390 (+)
ptch1 ptch1 coding downstream 241860 39155476 ~ 39234874 (+)
fancc fancc coding downstream 356299 39269915 ~ 39312098 (+)
trnaa-ugc-17 NA coding downstream 374973 39288589 ~ 39288662 (+)
G504796 NA non-coding upstream 1871 38911235 ~ 38911457 (+)
G504794 NA non-coding upstream 3266 38905132 ~ 38910062 (+)
G504742 NA non-coding upstream 106286 38806623 ~ 38807042 (+)
G504739 NA non-coding upstream 108904 38804196 ~ 38804424 (+)
G504733 NA non-coding upstream 117921 38795143 ~ 38795407 (+)
G504865 NA non-coding downstream 113374 39026990 ~ 39027474 (+)
G504896 NA non-coding downstream 145706 39059322 ~ 39059625 (+)
G504903 NA non-coding downstream 169268 39082884 ~ 39083096 (+)
G504886 NA non-coding downstream 171301 39084917 ~ 39086012 (+)
G504905 ercc6l2 non-coding downstream 180309 39093925 ~ 39094818 (+)
G499111 NA other upstream 4761591 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 5448273 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 5592980 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 5749067 33135282 ~ 33165186 (+)
polk polk other upstream 5984477 32926258 ~ 32936958 (+)
LOC110525927 smim15 other downstream 760396 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 821168 39734703 ~ 39750180 (+)
G505988 NA other downstream 1049036 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 1283184 40196800 ~ 40203886 (+)

Expression


Co-expression Network