Gene
RNA
| Item | Value |
|---|---|
| gene id | G505221 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39171922 ~ 39172186 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573627 | True | 265 | lncRNA | 0.48 | 1 | 39171922 | 39172186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hsd17b3 | hsd17b3 | coding | upstream | 103532 | 39042158 ~ 39068390 (+) |
| LOC110525918 | LOC106585148 | coding | upstream | 136728 | 39033662 ~ 39035194 (+) |
| zgc:162952 | LOC100195200 | coding | upstream | 279691 | 38865594 ~ 38892231 (+) |
| b3galt8 | LOC106585144 | coding | upstream | 310925 | 38858009 ~ 38860997 (+) |
| LOC110525909 | LOC100380751 | coding | upstream | 314475 | 38746654 ~ 38857447 (+) |
| fancc | fancc | coding | downstream | 97729 | 39269915 ~ 39312098 (+) |
| trnaa-ugc-17 | NA | coding | downstream | 116403 | 39288589 ~ 39288662 (+) |
| LOC110525923 | NA | coding | downstream | 230351 | 39402537 ~ 39405261 (+) |
| cbwd | cbwd1 | coding | downstream | 349537 | 39521723 ~ 39526646 (+) |
| foxd5 | LOC106584956 | coding | downstream | 361750 | 39533936 ~ 39535789 (+) |
| G505219 | NA | non-coding | upstream | 2599 | 39169102 ~ 39169323 (+) |
| G505180 | NA | non-coding | upstream | 49343 | 39122359 ~ 39122579 (+) |
| G504905 | ercc6l2 | non-coding | upstream | 77104 | 39093925 ~ 39094818 (+) |
| G504886 | NA | non-coding | upstream | 85910 | 39084917 ~ 39086012 (+) |
| G504903 | NA | non-coding | upstream | 88826 | 39082884 ~ 39083096 (+) |
| G505222 | NA | non-coding | downstream | 428 | 39172614 ~ 39172964 (+) |
| G505192 | NA | non-coding | downstream | 1136 | 39173322 ~ 39174958 (+) |
| G505227 | NA | non-coding | downstream | 10202 | 39182388 ~ 39182688 (+) |
| G505232 | NA | non-coding | downstream | 21865 | 39194051 ~ 39194286 (+) |
| G505242 | NA | non-coding | downstream | 39168 | 39211354 ~ 39211555 (+) |
| G499111 | NA | other | upstream | 5020185 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 5706867 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 5851574 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 6007661 | 33135282 ~ 33165186 (+) |
| polk | polk | other | upstream | 6243071 | 32926258 ~ 32936958 (+) |
| LOC110525927 | smim15 | other | downstream | 501826 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | other | downstream | 562598 | 39734703 ~ 39750180 (+) |
| G505988 | NA | other | downstream | 790466 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 1024614 | 40196800 ~ 40203886 (+) |
