Gene
RNA
| Item | Value |
|---|---|
| gene id | G505232 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39194051 ~ 39194286 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573640 | True | 236 | lncRNA | 0.43 | 1 | 39194051 | 39194286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hsd17b3 | hsd17b3 | coding | upstream | 125661 | 39042158 ~ 39068390 (+) |
| LOC110525918 | LOC106585148 | coding | upstream | 158857 | 39033662 ~ 39035194 (+) |
| zgc:162952 | LOC100195200 | coding | upstream | 301820 | 38865594 ~ 38892231 (+) |
| b3galt8 | LOC106585144 | coding | upstream | 333054 | 38858009 ~ 38860997 (+) |
| LOC110525909 | LOC100380751 | coding | upstream | 336604 | 38746654 ~ 38857447 (+) |
| fancc | fancc | coding | downstream | 75629 | 39269915 ~ 39312098 (+) |
| trnaa-ugc-17 | NA | coding | downstream | 94303 | 39288589 ~ 39288662 (+) |
| LOC110525923 | NA | coding | downstream | 208251 | 39402537 ~ 39405261 (+) |
| cbwd | cbwd1 | coding | downstream | 327437 | 39521723 ~ 39526646 (+) |
| foxd5 | LOC106584956 | coding | downstream | 339650 | 39533936 ~ 39535789 (+) |
| G505227 | NA | non-coding | upstream | 11363 | 39182388 ~ 39182688 (+) |
| G505192 | NA | non-coding | upstream | 19093 | 39173322 ~ 39174958 (+) |
| G505222 | NA | non-coding | upstream | 21087 | 39172614 ~ 39172964 (+) |
| G505221 | NA | non-coding | upstream | 21865 | 39171922 ~ 39172186 (+) |
| G505219 | NA | non-coding | upstream | 24728 | 39169102 ~ 39169323 (+) |
| G505242 | NA | non-coding | downstream | 17068 | 39211354 ~ 39211555 (+) |
| G505243 | NA | non-coding | downstream | 17469 | 39211755 ~ 39212065 (+) |
| G505248 | NA | non-coding | downstream | 25900 | 39220186 ~ 39220425 (+) |
| G505249 | NA | non-coding | downstream | 26175 | 39220461 ~ 39220998 (+) |
| G505250 | NA | non-coding | downstream | 27727 | 39222013 ~ 39222368 (+) |
| G499111 | NA | other | upstream | 5042314 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 5728996 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 5873703 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 6029790 | 33135282 ~ 33165186 (+) |
| polk | polk | other | upstream | 6265200 | 32926258 ~ 32936958 (+) |
| LOC110525927 | smim15 | other | downstream | 479726 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | other | downstream | 540498 | 39734703 ~ 39750180 (+) |
| G505988 | NA | other | downstream | 768366 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 1002514 | 40196800 ~ 40203886 (+) |
