Gene
RNA
| Item | Value |
|---|---|
| gene id | G505243 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39211755 ~ 39212065 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573652 | True | 311 | lncRNA | 0.37 | 1 | 39211755 | 39212065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hsd17b3 | hsd17b3 | coding | upstream | 143365 | 39042158 ~ 39068390 (+) |
| LOC110525918 | LOC106585148 | coding | upstream | 176561 | 39033662 ~ 39035194 (+) |
| zgc:162952 | LOC100195200 | coding | upstream | 319524 | 38865594 ~ 38892231 (+) |
| b3galt8 | LOC106585144 | coding | upstream | 350758 | 38858009 ~ 38860997 (+) |
| LOC110525909 | LOC100380751 | coding | upstream | 354308 | 38746654 ~ 38857447 (+) |
| fancc | fancc | coding | downstream | 57850 | 39269915 ~ 39312098 (+) |
| trnaa-ugc-17 | NA | coding | downstream | 76524 | 39288589 ~ 39288662 (+) |
| LOC110525923 | NA | coding | downstream | 190472 | 39402537 ~ 39405261 (+) |
| cbwd | cbwd1 | coding | downstream | 309658 | 39521723 ~ 39526646 (+) |
| foxd5 | LOC106584956 | coding | downstream | 321871 | 39533936 ~ 39535789 (+) |
| G505242 | NA | non-coding | upstream | 200 | 39211354 ~ 39211555 (+) |
| G505232 | NA | non-coding | upstream | 17469 | 39194051 ~ 39194286 (+) |
| G505227 | NA | non-coding | upstream | 29067 | 39182388 ~ 39182688 (+) |
| G505192 | NA | non-coding | upstream | 36797 | 39173322 ~ 39174958 (+) |
| G505222 | NA | non-coding | upstream | 38791 | 39172614 ~ 39172964 (+) |
| G505248 | NA | non-coding | downstream | 8121 | 39220186 ~ 39220425 (+) |
| G505249 | NA | non-coding | downstream | 8396 | 39220461 ~ 39220998 (+) |
| G505250 | NA | non-coding | downstream | 9948 | 39222013 ~ 39222368 (+) |
| G505251 | NA | non-coding | downstream | 10674 | 39222739 ~ 39223107 (+) |
| G505253 | NA | non-coding | downstream | 14812 | 39226877 ~ 39227171 (+) |
| G499111 | NA | other | upstream | 5060018 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 5746700 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 5891407 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 6047494 | 33135282 ~ 33165186 (+) |
| polk | polk | other | upstream | 6282904 | 32926258 ~ 32936958 (+) |
| LOC110525927 | smim15 | other | downstream | 461947 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | other | downstream | 522719 | 39734703 ~ 39750180 (+) |
| G505988 | NA | other | downstream | 750587 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 984735 | 40196800 ~ 40203886 (+) |
