Gene
RNA
| Item | Value |
|---|---|
| gene id | G505485 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39224963 ~ 39225202 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573903 | True | 240 | lncRNA | 0.50 | 1 | 39224963 | 39225202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ercc6l2 | ercc6l2 | coding | downstream | 118342 | 39090231 ~ 39106621 (-) |
| pnpla7b | LOC106585146 | coding | downstream | 191532 | 39016692 ~ 39033431 (-) |
| LOC110525916 | ccdc183 | coding | downstream | 209462 | 39005211 ~ 39015501 (-) |
| nsmfb | nsmf | coding | downstream | 257423 | 38926899 ~ 38967540 (-) |
| rabl6b | LOC106585139 | coding | downstream | 560338 | 38635426 ~ 38664625 (-) |
| aopep | cssa24h9orf3 | coding | upstream | 88269 | 39313471 ~ 39434971 (-) |
| dock8 | LOC106585156 | coding | upstream | 215350 | 39440552 ~ 39517123 (-) |
| LOC110525926 | zswim6 | coding | upstream | 394080 | 39619282 ~ 39670076 (-) |
| ndufaf2 | ndufaf2 | coding | upstream | 454292 | 39679494 ~ 39715116 (-) |
| LOC110525929 | LOC106585162 | coding | upstream | 526524 | 39751726 ~ 39778538 (-) |
| G505483 | NA | non-coding | downstream | 200 | 39223639 ~ 39224763 (-) |
| G505484 | NA | non-coding | downstream | 885 | 39223809 ~ 39224078 (-) |
| G505482 | ptch1 | non-coding | downstream | 4572 | 39219671 ~ 39220391 (-) |
| G505481 | NA | non-coding | downstream | 5993 | 39218527 ~ 39218970 (-) |
| G505480 | NA | non-coding | downstream | 7252 | 39217192 ~ 39217711 (-) |
| G505486 | NA | non-coding | upstream | 1801 | 39227003 ~ 39227233 (-) |
| G505489 | NA | non-coding | upstream | 4852 | 39230054 ~ 39230524 (-) |
| G505490 | NA | non-coding | upstream | 6440 | 39231642 ~ 39231974 (-) |
| G505492 | ptch1 | non-coding | upstream | 7007 | 39232209 ~ 39232544 (-) |
| G505491 | NA | non-coding | upstream | 8218 | 39233420 ~ 39233840 (-) |
| G505472 | NA | other | downstream | 18694 | 39205878 ~ 39206269 (-) |
| G503159 | LOC106580514 | other | downstream | 1888411 | 37331484 ~ 37336552 (-) |
| G503064 | NA | other | downstream | 1984026 | 37239844 ~ 37240937 (-) |
| vamp8 | LOC106585118 | other | downstream | 2159974 | 37050701 ~ 37065030 (-) |
| G505493 | ptch1 | other | upstream | 7491 | 39232693 ~ 39233210 (-) |
| G506641 | NA | other | upstream | 398483 | 39623685 ~ 39624344 (-) |
| LOC110525932 | LOC106585164 | other | upstream | 612446 | 39826260 ~ 39877951 (-) |
