Gene
RNA
| Item | Value |
|---|---|
| gene id | G505348 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39418090 ~ 39418322 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573760 | True | 233 | lncRNA | 0.54 | 1 | 39418090 | 39418322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525923 | NA | coding | upstream | 12829 | 39402537 ~ 39405261 (+) |
| fancc | fancc | coding | upstream | 105992 | 39269915 ~ 39312098 (+) |
| trnaa-ugc-17 | NA | coding | upstream | 129428 | 39288589 ~ 39288662 (+) |
| ptch1 | ptch1 | coding | upstream | 183216 | 39155476 ~ 39234874 (+) |
| hsd17b3 | hsd17b3 | coding | upstream | 349700 | 39042158 ~ 39068390 (+) |
| cbwd | cbwd1 | coding | downstream | 103401 | 39521723 ~ 39526646 (+) |
| foxd5 | LOC106584956 | coding | downstream | 115614 | 39533936 ~ 39535789 (+) |
| pgm5 | LOC106585157 | coding | downstream | 118322 | 39536644 ~ 39583427 (+) |
| LOC110525927 | smim15 | coding | downstream | 255642 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | coding | downstream | 316381 | 39734703 ~ 39750180 (+) |
| G505347 | NA | non-coding | upstream | 946 | 39416866 ~ 39417144 (+) |
| G505329 | NA | non-coding | upstream | 29055 | 39388761 ~ 39389035 (+) |
| G505316 | NA | non-coding | upstream | 46424 | 39371410 ~ 39371666 (+) |
| G505314 | NA | non-coding | upstream | 47441 | 39370420 ~ 39370649 (+) |
| G505206 | NA | non-coding | upstream | 103010 | 39313150 ~ 39315080 (+) |
| G505349 | NA | non-coding | downstream | 940 | 39419262 ~ 39419488 (+) |
| G505354 | NA | non-coding | downstream | 6477 | 39424799 ~ 39425157 (+) |
| G505356 | NA | non-coding | downstream | 8346 | 39426668 ~ 39426903 (+) |
| G505359 | NA | non-coding | downstream | 11483 | 39429805 ~ 39430032 (+) |
| G505363 | NA | non-coding | downstream | 14358 | 39432680 ~ 39432901 (+) |
| G499111 | NA | other | upstream | 5266353 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 5953035 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 6097742 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 6253829 | 33135282 ~ 33165186 (+) |
| G505988 | NA | other | downstream | 544330 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 778478 | 40196800 ~ 40203886 (+) |
| LOC110525949 | LOC106585178 | other | downstream | 838745 | 40256994 ~ 40259050 (+) |
