Gene
RNA
| Item | Value |
|---|---|
| gene id | G505333 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39435988 ~ 39531191 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU573743 | True | 697 | lncRNA | 0.32 | 2 | 39435988 | 39531191 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525923 | NA | coding | upstream | 30727 | 39402537 ~ 39405261 (+) |
| fancc | fancc | coding | upstream | 123890 | 39269915 ~ 39312098 (+) |
| trnaa-ugc-17 | NA | coding | upstream | 147326 | 39288589 ~ 39288662 (+) |
| ptch1 | ptch1 | coding | upstream | 201114 | 39155476 ~ 39234874 (+) |
| hsd17b3 | hsd17b3 | coding | upstream | 367598 | 39042158 ~ 39068390 (+) |
| foxd5 | LOC106584956 | coding | downstream | 2745 | 39533936 ~ 39535789 (+) |
| pgm5 | LOC106585157 | coding | downstream | 5453 | 39536644 ~ 39583427 (+) |
| LOC110525927 | smim15 | coding | downstream | 142773 | 39673964 ~ 39680031 (+) |
| LOC110525928 | LOC106585161 | coding | downstream | 203512 | 39734703 ~ 39750180 (+) |
| LOC110525933 | LOC106585165 | coding | downstream | 351586 | 39882777 ~ 39901525 (+) |
| G505363 | NA | non-coding | upstream | 3087 | 39432680 ~ 39432901 (+) |
| G505359 | NA | non-coding | upstream | 5956 | 39429805 ~ 39430032 (+) |
| G505356 | NA | non-coding | upstream | 9085 | 39426668 ~ 39426903 (+) |
| G505354 | NA | non-coding | upstream | 10831 | 39424799 ~ 39425157 (+) |
| G505349 | NA | non-coding | upstream | 16500 | 39419262 ~ 39419488 (+) |
| G505697 | NA | non-coding | downstream | 50820 | 39582011 ~ 39587770 (+) |
| G505795 | NA | non-coding | downstream | 136063 | 39667254 ~ 39667805 (+) |
| G505803 | NA | non-coding | downstream | 139962 | 39671153 ~ 39671452 (+) |
| G505827 | NA | non-coding | downstream | 185200 | 39716391 ~ 39717493 (+) |
| G505857 | NA | non-coding | downstream | 233777 | 39764968 ~ 39765533 (+) |
| G499111 | NA | other | upstream | 5284251 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 5970933 | 33447246 ~ 33465055 (+) |
| c6h22orf39 | cssa24h22orf39 | other | upstream | 6115640 | 33317578 ~ 33320353 (+) |
| LOC110525799 | LOC106585046 | other | upstream | 6271727 | 33135282 ~ 33165186 (+) |
| G505988 | NA | other | downstream | 431461 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 665609 | 40196800 ~ 40203886 (+) |
| LOC110525949 | LOC106585178 | other | downstream | 725876 | 40256994 ~ 40259050 (+) |
