G506641


Basic Information

Item Value
gene id G506641
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39623685 ~ 39624344 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU575200
ggtgggagactctgtccataggacaacaatcagtggtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacgagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatcccaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgg

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU575200 True 546 TUCP 0.43 2 39623685 39624344

Neighbor

gene id symbol gene type direction distance location
dock8 LOC106585156 coding downstream 106562 39440552 ~ 39517123 (-)
aopep cssa24h9orf3 coding downstream 188714 39313471 ~ 39434971 (-)
ercc6l2 ercc6l2 coding downstream 517064 39090231 ~ 39106621 (-)
pnpla7b LOC106585146 coding downstream 590254 39016692 ~ 39033431 (-)
LOC110525916 ccdc183 coding downstream 608184 39005211 ~ 39015501 (-)
ndufaf2 ndufaf2 coding upstream 55150 39679494 ~ 39715116 (-)
LOC110525929 LOC106585162 coding upstream 127382 39751726 ~ 39778538 (-)
LOC110525931 LOC106585163 coding upstream 165789 39790133 ~ 39805341 (-)
LOC110525027 LOC106584957 coding upstream 183857 39808201 ~ 39819427 (-)
LOC110525932 LOC106585164 coding upstream 201916 39826260 ~ 39877951 (-)
G506639 NA non-coding downstream 6394 39616938 ~ 39617291 (-)
G505752 NA non-coding downstream 15888 39607572 ~ 39607797 (-)
G505748 NA non-coding downstream 19294 39604097 ~ 39604391 (-)
G505743 NA non-coding downstream 23498 39599927 ~ 39600187 (-)
G505739 NA non-coding downstream 27672 39595797 ~ 39596013 (-)
G506795 NA non-coding upstream 281205 39905549 ~ 39905853 (-)
G506802 NA non-coding upstream 308176 39932520 ~ 39932855 (-)
G506805 NA non-coding upstream 323157 39947501 ~ 39947725 (-)
G506806 NA non-coding upstream 327355 39951699 ~ 39951922 (-)
G506865 NA non-coding upstream 424285 40048629 ~ 40048833 (-)
G505493 ptch1 other downstream 390475 39232693 ~ 39233210 (-)
G505472 NA other downstream 417416 39205878 ~ 39206269 (-)
nsmfb nsmf other downstream 656282 38926899 ~ 38967540 (-)
G503159 LOC106580514 other downstream 2287133 37331484 ~ 37336552 (-)
G506785 NA other upstream 262678 39887022 ~ 39889931 (-)
G507063 NA other upstream 916315 40540659 ~ 40542329 (-)
G507906 selenop other upstream 1796680 41421024 ~ 41461922 (-)

Expression


Co-expression Network