G505827


Basic Information

Item Value
gene id G505827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39716391 ~ 39717493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574269
catgtaactacaaaagtgtcaaacaaatcaaaatatattttatatttaagattcttcaaagtagccaccctttgccttgacagctgtGCAcgctcttggaattctctcaaccagcttcatgaggtagtcacctggaatgcaattcaattaacaggacaatgacccaaagcacacctccaggctgtgtaagggctatttgacgaaggagagtgatggagtgctgcatcagatgacctggcctccacaatcacccaacctcaacccaattgagatggtttgggatgagttggaccacagagtgaaggaaaagcagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU574269 True 314 lncRNA 0.44 2 39716391 39717493

Neighbor

gene id symbol gene type direction distance location
LOC110525927 smim15 coding upstream 38126 39673964 ~ 39680031 (+)
pgm5 LOC106585157 coding upstream 132964 39536644 ~ 39583427 (+)
foxd5 LOC106584956 coding upstream 180602 39533936 ~ 39535789 (+)
cbwd cbwd1 coding upstream 189745 39521723 ~ 39526646 (+)
LOC110525923 NA coding upstream 311130 39402537 ~ 39405261 (+)
LOC110525928 LOC106585161 coding downstream 17210 39734703 ~ 39750180 (+)
LOC110525933 LOC106585165 coding downstream 165284 39882777 ~ 39901525 (+)
LOC110525934 LOC106580580 coding downstream 198645 39916138 ~ 39921723 (+)
LOC110525942 LOC106585173 coding downstream 429843 40147336 ~ 40154986 (+)
LOC118965025 NA coding downstream 442671 40160164 ~ 40165614 (+)
G505803 NA non-coding upstream 44939 39671153 ~ 39671452 (+)
G505795 NA non-coding upstream 48586 39667254 ~ 39667805 (+)
G505697 NA non-coding upstream 128621 39582011 ~ 39587770 (+)
G505333 NA non-coding upstream 185200 39435988 ~ 39531191 (+)
G505377 LOC106605384 non-coding upstream 231722 39464768 ~ 39484669 (+)
G505857 NA non-coding downstream 47475 39764968 ~ 39765533 (+)
G505865 LOC106585162 non-coding downstream 55320 39772813 ~ 39776463 (+)
G505882 NA non-coding downstream 72673 39790166 ~ 39864875 (+)
G505955 gk non-coding downstream 190880 39908373 ~ 39911925 (+)
G505962 NA non-coding downstream 207402 39924895 ~ 39925184 (+)
fancc fancc other upstream 404517 39269915 ~ 39312098 (+)
G499111 NA other upstream 5564654 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 6251336 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 6396043 33317578 ~ 33320353 (+)
G505988 NA other downstream 245159 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 479307 40196800 ~ 40203886 (+)
LOC110525949 LOC106585178 other downstream 539574 40256994 ~ 40259050 (+)
G506281 LOC106585187 other downstream 827370 40544863 ~ 40547513 (+)

Expression


Co-expression Network