Gene
RNA
| Item | Value |
|---|---|
| gene id | G505865 |
| gene name | LOC106585162 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39772813 ~ 39776463 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: rapamycin-insensitive companion of mTOR-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU574311 | True | 244 | lncRNA | 0.51 | 4 | 39772813 | 39776463 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525928 | LOC106585161 | coding | upstream | 22633 | 39734703 ~ 39750180 (+) |
| LOC110525927 | smim15 | coding | upstream | 94548 | 39673964 ~ 39680031 (+) |
| pgm5 | LOC106585157 | coding | upstream | 189386 | 39536644 ~ 39583427 (+) |
| foxd5 | LOC106584956 | coding | upstream | 237024 | 39533936 ~ 39535789 (+) |
| cbwd | cbwd1 | coding | upstream | 246167 | 39521723 ~ 39526646 (+) |
| LOC110525933 | LOC106585165 | coding | downstream | 106314 | 39882777 ~ 39901525 (+) |
| LOC110525934 | LOC106580580 | coding | downstream | 139675 | 39916138 ~ 39921723 (+) |
| LOC110525942 | LOC106585173 | coding | downstream | 370873 | 40147336 ~ 40154986 (+) |
| LOC118965025 | NA | coding | downstream | 383701 | 40160164 ~ 40165614 (+) |
| LOC110525943 | NA | coding | downstream | 395857 | 40172320 ~ 40178096 (+) |
| G505857 | NA | non-coding | upstream | 7280 | 39764968 ~ 39765533 (+) |
| G505827 | NA | non-coding | upstream | 55320 | 39716391 ~ 39717493 (+) |
| G505803 | NA | non-coding | upstream | 101361 | 39671153 ~ 39671452 (+) |
| G505795 | NA | non-coding | upstream | 105008 | 39667254 ~ 39667805 (+) |
| G505697 | NA | non-coding | upstream | 185043 | 39582011 ~ 39587770 (+) |
| G505882 | NA | non-coding | downstream | 13703 | 39790166 ~ 39864875 (+) |
| G505955 | gk | non-coding | downstream | 131910 | 39908373 ~ 39911925 (+) |
| G505962 | NA | non-coding | downstream | 148432 | 39924895 ~ 39925184 (+) |
| G505972 | npc1l1 | non-coding | downstream | 164700 | 39941163 ~ 39941755 (+) |
| G505984 | NA | non-coding | downstream | 182405 | 39958868 ~ 40010338 (+) |
| fancc | fancc | other | upstream | 460939 | 39269915 ~ 39312098 (+) |
| G499111 | NA | other | upstream | 5621076 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 6307758 | 33447246 ~ 33465055 (+) |
| G505988 | NA | other | downstream | 186189 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 420337 | 40196800 ~ 40203886 (+) |
| LOC110525949 | LOC106585178 | other | downstream | 480604 | 40256994 ~ 40259050 (+) |
| G506281 | LOC106585187 | other | downstream | 768400 | 40544863 ~ 40547513 (+) |
| G506285 | NA | other | downstream | 789604 | 40566067 ~ 40566429 (+) |
