G505955 (gk)


Basic Information

Item Value
gene id G505955
gene name gk
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39908373 ~ 39911925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574405
CAGCAGGTCAGAGGCTTCTCCGTTAAACAGCAGCTCCTCGTTCACCAGCTTCAACAATACCAGCCGCACCAGCTCTCCCATGTACTTCCCACTGATCAGCTTTTCATAGAGTTGTTGTCCAGGGTTGAGTGATGTCTCGTCCACCACCCTGTCGTACTCCAGTCTAAACTCCTCCAGCTCTCCGTTGGCTCCAAAGGCCCCCCACTCTGTGTTCACACacatcctcccctcttccccctccaccAGCTCCACTGTCCGCATCTCCTCCATGTAGCAAGCGTTACACCCAGTACCCACAATCATTCCCACTTCGCAGCTGCGGTCCTCATAGTAACAGGATATCATGGTGGCAACTGTATCGTTCACCATGGCAACGACGTCCATCTCAAAGTCccctctcctcttgATGGCATCTCTCAGTAGTCCCACCACGTTGTTACCCTCTGCTCCAGACGCCTTGAACCCTTTGGTCCAGTTCAGTAGGATGCCCTTGTCTATGTTCTCGTGTCGTACAGGAAAAGAGAAGGTGAAACCCAGAGGAAGCTTCTTGTGCTtgatgtgttgtctgttcagGAAGTCTGATATACACTCAGCAATGTAGTCAAAGAGCATCTCAGCCGTGCCTGTCATGGCGTCCTCAGAGATGGAGTACATCTGGTGTTTGGTCTCCAccttccatcccctctcctcatcctcccccacCTTCACCAACATCACACGGAAGTTAGTCCCCCCCAGGTCCAGGGCCAGGAAATCACCCACCTCTGACACAGCGCAACACACAGAACGGTGTCATATAGgatcaaacacacacagcaggggTTTCTGGAATAAGAACATTGTTCTatcttatttttttgttttttaaagcaCTACAAATTGAATGTCAAATAAATCTAATAAGAAATGTCATGTTCTTTCATGTGCCATCACCCATTTAGTACAAATAGCCTAGGTATCTTGCATTTACATTGTTATCTCGCAAGAAAGCATGATATAAACTAGGTATATGCCTCTACCTGATCCTTCAGGGGTAGAACAGACGTAGGTGGGCAGCATTTTGACACTGGCCTCCTGGTGCGTCTCTACACGCAGTCCCCGGTCCatctccctcatcatcctcttcatCACCTCCTTCAACTGCTCCTTCTTCAGCCTGAACTCCGACAGGATCTGCTCCACCATGATGACTGTCTCTAGCACAGAGCTGAGGCTACAAGGCATCTTCCCCATCTGGCCCATGAAGGAGCTGACGCACAGTATCTTGTCTAGCTCTCTAAATCACTTGCGTGTGTATCTAGGTGTGTGGTAAGTGTGTGTTtggcatgagtgtgtgtgtatgcagaggCAGTGAACTGTAAATGTAGTTGAATGAGGACCTCGGCTGTTTTTATGCTCTGGTAAAGGGGGCTGGCCGGGGGAAGATGGAGGCCCACACAAATGCCCACCCCCTAACCCTTCACCC

Function

symbol description
gk Enables glycerol kinase activity. Involved in glycerol metabolic process; glycerol-3-phosphate biosynthetic process; and triglyceride metabolic process. Located in extracellular exosome. Implicated in glycerol kinase deficiency.

NR:

description
glucokinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU574405 True 1465 lncRNA 0.50 7 39908373 39911925

Neighbor

gene id symbol gene type direction distance location
LOC110525933 LOC106585165 coding upstream 6848 39882777 ~ 39901525 (+)
LOC110525928 LOC106585161 coding upstream 158193 39734703 ~ 39750180 (+)
LOC110525927 smim15 coding upstream 230108 39673964 ~ 39680031 (+)
pgm5 LOC106585157 coding upstream 324946 39536644 ~ 39583427 (+)
foxd5 LOC106584956 coding upstream 372584 39533936 ~ 39535789 (+)
LOC110525934 LOC106580580 coding downstream 4213 39916138 ~ 39921723 (+)
LOC110525942 LOC106585173 coding downstream 235411 40147336 ~ 40154986 (+)
LOC118965025 NA coding downstream 248239 40160164 ~ 40165614 (+)
LOC110525943 NA coding downstream 260395 40172320 ~ 40178096 (+)
LOC110525945 LOC106585174 coding downstream 273246 40185171 ~ 40191808 (+)
G505882 NA non-coding upstream 43498 39790166 ~ 39864875 (+)
G505865 LOC106585162 non-coding upstream 131910 39772813 ~ 39776463 (+)
G505857 NA non-coding upstream 142840 39764968 ~ 39765533 (+)
G505827 NA non-coding upstream 190880 39716391 ~ 39717493 (+)
G505803 NA non-coding upstream 236921 39671153 ~ 39671452 (+)
G505962 NA non-coding downstream 12970 39924895 ~ 39925184 (+)
G505972 npc1l1 non-coding downstream 29238 39941163 ~ 39941755 (+)
G505984 NA non-coding downstream 46943 39958868 ~ 40010338 (+)
G505997 LOC106584939 non-coding downstream 64541 39976466 ~ 39982658 (+)
G506019 LOC106585169 non-coding downstream 109810 40021735 ~ 40026395 (+)
fancc fancc other upstream 596499 39269915 ~ 39312098 (+)
G499111 NA other upstream 5756636 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 6443318 33447246 ~ 33465055 (+)
G505988 NA other downstream 50727 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 284875 40196800 ~ 40203886 (+)
LOC110525949 LOC106585178 other downstream 345142 40256994 ~ 40259050 (+)
G506281 LOC106585187 other downstream 632938 40544863 ~ 40547513 (+)
G506285 NA other downstream 654142 40566067 ~ 40566429 (+)

Expression


Co-expression Network