Gene
RNA
| Item | Value |
|---|---|
| gene id | G505962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39924895 ~ 39925184 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU574412 | True | 290 | lncRNA | 0.38 | 1 | 39924895 | 39925184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525934 | LOC106580580 | coding | upstream | 3172 | 39916138 ~ 39921723 (+) |
| LOC110525933 | LOC106585165 | coding | upstream | 23370 | 39882777 ~ 39901525 (+) |
| LOC110525928 | LOC106585161 | coding | upstream | 174715 | 39734703 ~ 39750180 (+) |
| LOC110525927 | smim15 | coding | upstream | 246630 | 39673964 ~ 39680031 (+) |
| pgm5 | LOC106585157 | coding | upstream | 341468 | 39536644 ~ 39583427 (+) |
| LOC110525942 | LOC106585173 | coding | downstream | 222152 | 40147336 ~ 40154986 (+) |
| LOC118965025 | NA | coding | downstream | 234980 | 40160164 ~ 40165614 (+) |
| LOC110525943 | NA | coding | downstream | 247136 | 40172320 ~ 40178096 (+) |
| LOC110525945 | LOC106585174 | coding | downstream | 259987 | 40185171 ~ 40191808 (+) |
| LOC110525947 | LOC106585175 | coding | downstream | 279719 | 40204903 ~ 40215454 (+) |
| G505955 | gk | non-coding | upstream | 12970 | 39908373 ~ 39911925 (+) |
| G505882 | NA | non-coding | upstream | 60020 | 39790166 ~ 39864875 (+) |
| G505865 | LOC106585162 | non-coding | upstream | 148432 | 39772813 ~ 39776463 (+) |
| G505857 | NA | non-coding | upstream | 159362 | 39764968 ~ 39765533 (+) |
| G505827 | NA | non-coding | upstream | 207402 | 39716391 ~ 39717493 (+) |
| G505972 | npc1l1 | non-coding | downstream | 15979 | 39941163 ~ 39941755 (+) |
| G505984 | NA | non-coding | downstream | 33684 | 39958868 ~ 40010338 (+) |
| G505997 | LOC106584939 | non-coding | downstream | 51282 | 39976466 ~ 39982658 (+) |
| G506019 | LOC106585169 | non-coding | downstream | 96551 | 40021735 ~ 40026395 (+) |
| G506033 | LOC106584485 | non-coding | downstream | 125041 | 40050225 ~ 40050485 (+) |
| fancc | fancc | other | upstream | 613021 | 39269915 ~ 39312098 (+) |
| G499111 | NA | other | upstream | 5773158 | 34151140 ~ 34151737 (+) |
| LOC110525816 | LOC106585060 | other | upstream | 6459840 | 33447246 ~ 33465055 (+) |
| G505988 | NA | other | downstream | 37468 | 39962652 ~ 39963098 (+) |
| G506095 | atp5a1 | other | downstream | 271616 | 40196800 ~ 40203886 (+) |
| LOC110525949 | LOC106585178 | other | downstream | 331883 | 40256994 ~ 40259050 (+) |
| G506281 | LOC106585187 | other | downstream | 619679 | 40544863 ~ 40547513 (+) |
| G506285 | NA | other | downstream | 640883 | 40566067 ~ 40566429 (+) |
