G505988


Basic Information

Item Value
gene id G505988
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39962652 ~ 39963098 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574449
CACCTGAAAAAGGAGGCGTCTGCTGTGGCCCTGGGTTCATCCTCAGGCTCTGcgtacccccctctccctctgtcatcctcccctctccctctgtcatcctcctcttccctgtGGCCATAGCCAtgtcccctccactcctcctccggCTGCTGGTATCCTCTGTTATACTGATCTTCTTCTCGCTGCTGGTATCCCCTGTTCCACTGGTCTTCTTCTGGCTGCTGGTATCCCCTGTTCCACTGGTCTTCTTCTGGCTGCTGGTATCCCCTGTTCCACTGGTCCTCTTCTGGCTCCTGGTATCCCCTGTTCCACTGGTCTTCTTCTGGCTGCTGGTATCCCCTGTTTCTATCGTCTTCCTCCGGCTCCTCGCGGTCGTAGTCCCTCCCCCACGCCGTCACGTCAAACTCCTCGTAC

Function

NR:

description
inactive carboxypeptidase-like protein X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU574449 True 414 TUCP 0.58 2 39962652 39963098

Neighbor

gene id symbol gene type direction distance location
LOC110525934 LOC106580580 coding upstream 40929 39916138 ~ 39921723 (+)
LOC110525933 LOC106585165 coding upstream 61127 39882777 ~ 39901525 (+)
LOC110525928 LOC106585161 coding upstream 212472 39734703 ~ 39750180 (+)
LOC110525927 smim15 coding upstream 284387 39673964 ~ 39680031 (+)
pgm5 LOC106585157 coding upstream 379225 39536644 ~ 39583427 (+)
LOC110525942 LOC106585173 coding downstream 184238 40147336 ~ 40154986 (+)
LOC118965025 NA coding downstream 197066 40160164 ~ 40165614 (+)
LOC110525943 NA coding downstream 209222 40172320 ~ 40178096 (+)
LOC110525945 LOC106585174 coding downstream 222073 40185171 ~ 40191808 (+)
LOC110525947 LOC106585175 coding downstream 241805 40204903 ~ 40215454 (+)
G505972 npc1l1 non-coding upstream 20897 39941163 ~ 39941755 (+)
G505962 NA non-coding upstream 37468 39924895 ~ 39925184 (+)
G505955 gk non-coding upstream 50727 39908373 ~ 39911925 (+)
G505882 NA non-coding upstream 97777 39790166 ~ 39864875 (+)
G505865 LOC106585162 non-coding upstream 186189 39772813 ~ 39776463 (+)
G505997 LOC106584939 non-coding downstream 13368 39976466 ~ 39982658 (+)
G506019 LOC106585169 non-coding downstream 58637 40021735 ~ 40026395 (+)
G506033 LOC106584485 non-coding downstream 87127 40050225 ~ 40050485 (+)
G506035 NA non-coding downstream 89360 40052458 ~ 40052693 (+)
G506038 NA non-coding downstream 92941 40056039 ~ 40056941 (+)
fancc fancc other upstream 650778 39269915 ~ 39312098 (+)
G499111 NA other upstream 5810915 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 6497597 33447246 ~ 33465055 (+)
G506095 atp5a1 other downstream 233702 40196800 ~ 40203886 (+)
LOC110525949 LOC106585178 other downstream 293969 40256994 ~ 40259050 (+)
G506281 LOC106585187 other downstream 581765 40544863 ~ 40547513 (+)
G506285 NA other downstream 602969 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 605628 40568637 ~ 40886427 (+)

Expression


Co-expression Network