Gene
RNA
| Item | Value |
|---|---|
| gene id | G506866 |
| gene name | LOC106563826 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40049303 ~ 40049566 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: general transcription factor II-I repeat domain-containing protein 2B-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU575436 | True | 264 | lncRNA | 0.52 | 1 | 40049303 | 40049566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| star | star | coding | downstream | 8704 | 40036206 ~ 40040599 (-) |
| LOC110525939 | LOC106585169 | coding | downstream | 15576 | 40021719 ~ 40033727 (-) |
| LOC110525938 | aebp1 | coding | downstream | 66228 | 39958861 ~ 39983075 (-) |
| npc1l1 | npc1l1 | coding | downstream | 102725 | 39935328 ~ 39946578 (-) |
| gk | gk | coding | downstream | 137481 | 39906570 ~ 39911822 (-) |
| LOC110525940 | LOC106585171 | coding | upstream | 6445 | 40056011 ~ 40132392 (-) |
| LOC110525941 | LOC106585172 | coding | upstream | 86631 | 40136197 ~ 40139203 (-) |
| LOC110525946 | atp5a1 | coding | upstream | 144999 | 40194565 ~ 40204986 (-) |
| LOC110525948 | LOC106585177 | coding | upstream | 166589 | 40216155 ~ 40257079 (-) |
| LOC110515628 | LOC106584960 | coding | upstream | 219724 | 40269290 ~ 40272441 (-) |
| G506865 | NA | non-coding | downstream | 470 | 40048629 ~ 40048833 (-) |
| G506806 | NA | non-coding | downstream | 97381 | 39951699 ~ 39951922 (-) |
| G506805 | NA | non-coding | downstream | 101578 | 39947501 ~ 39947725 (-) |
| G506802 | NA | non-coding | downstream | 116448 | 39932520 ~ 39932855 (-) |
| G506795 | NA | non-coding | downstream | 143450 | 39905549 ~ 39905853 (-) |
| G506894 | NA | non-coding | upstream | 109475 | 40159041 ~ 40159271 (-) |
| G506897 | NA | non-coding | upstream | 113618 | 40163184 ~ 40163407 (-) |
| G506899 | NA | non-coding | upstream | 115129 | 40164695 ~ 40165126 (-) |
| G506901 | NA | non-coding | upstream | 116790 | 40166356 ~ 40166643 (-) |
| G506785 | NA | other | downstream | 159372 | 39887022 ~ 39889931 (-) |
| LOC110525932 | LOC106585164 | other | downstream | 211143 | 39826260 ~ 39877951 (-) |
| LOC110525929 | LOC106585162 | other | downstream | 284527 | 39751726 ~ 39778538 (-) |
| G506641 | NA | other | downstream | 424959 | 39623685 ~ 39624344 (-) |
| aopep | cssa24h9orf3 | other | downstream | 625813 | 39313471 ~ 39434971 (-) |
| G507063 | NA | other | upstream | 491093 | 40540659 ~ 40542329 (-) |
| G507906 | selenop | other | upstream | 1371458 | 41421024 ~ 41461922 (-) |
| znf131 | znf131 | other | upstream | 1385409 | 41431651 ~ 41459095 (-) |
| G508303 | NA | other | upstream | 1771289 | 41820855 ~ 41821210 (-) |
| G508891 | NA | other | upstream | 2094531 | 42144097 ~ 42144885 (-) |
