G506127


Basic Information

Item Value
gene id G506127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 40180371 ~ 40180617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574637
gatatgcatctgttggtcacagaaaccTTAAAACGAGGTAGGGgtgtagatcagaaaaccagacagtatctggtgtgaccaccacttccctcatgcagcgcaaatggtcgggcactgatgttgggcaattaggcctggctcgcagtcggcgtttcaactcatcccaaaggtgttcgatagggttgagatcagggctctgtgcagaccagtcaagttttTCTACACCAATCTCCacaaaccctttctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU574637 True 247 lncRNA 0.50 1 40180371 40180617

Neighbor

gene id symbol gene type direction distance location
LOC110525943 NA coding upstream 2275 40172320 ~ 40178096 (+)
LOC118965025 NA coding upstream 14757 40160164 ~ 40165614 (+)
LOC110525942 LOC106585173 coding upstream 25385 40147336 ~ 40154986 (+)
LOC110525934 LOC106580580 coding upstream 258648 39916138 ~ 39921723 (+)
LOC110525933 LOC106585165 coding upstream 278846 39882777 ~ 39901525 (+)
LOC110525945 LOC106585174 coding downstream 4554 40185171 ~ 40191808 (+)
LOC110525947 LOC106585175 coding downstream 24286 40204903 ~ 40215454 (+)
LOC110525949 LOC106585178 coding downstream 76377 40256994 ~ 40259050 (+)
LOC110525953 LOC106584961 coding downstream 105849 40286466 ~ 40309855 (+)
LOC110525028 fabpl coding downstream 134246 40314863 ~ 40317433 (+)
G506112 NA non-coding upstream 13410 40166344 ~ 40166961 (+)
G506039 LOC108412098 non-coding upstream 117757 40061587 ~ 40062614 (+)
G506038 NA non-coding upstream 123430 40056039 ~ 40056941 (+)
G506035 NA non-coding upstream 127678 40052458 ~ 40052693 (+)
G506033 LOC106584485 non-coding upstream 129886 40050225 ~ 40050485 (+)
G506129 NA non-coding downstream 1553 40182170 ~ 40182387 (+)
G506100 NA non-coding downstream 13215 40193832 ~ 40194236 (+)
G506096 NA non-coding downstream 13971 40194588 ~ 40196747 (+)
G506157 NA non-coding downstream 78553 40259170 ~ 40260881 (+)
G505988 NA other upstream 217273 39962652 ~ 39963098 (+)
LOC110525928 LOC106585161 other upstream 431891 39734703 ~ 39750180 (+)
LOC110525927 smim15 other upstream 500340 39673964 ~ 39680031 (+)
fancc fancc other upstream 868497 39269915 ~ 39312098 (+)
G499111 NA other upstream 6028634 34151140 ~ 34151737 (+)
G506095 atp5a1 other downstream 16183 40196800 ~ 40203886 (+)
G506281 LOC106585187 other downstream 364246 40544863 ~ 40547513 (+)
G506285 NA other downstream 385450 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 388109 40568637 ~ 40886427 (+)

Expression


Co-expression Network