G506129


Basic Information

Item Value
gene id G506129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 40182170 ~ 40182387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574639
gagcttcAGGCAGTTGGATTTGGGGATgcaattttaggcgaaaatttgagaaaaaaaaaggGTCCAATCCTTGATTTAGATGACCTCAGCAGaactctctcactcccctcccaCCAGGGAGACCCAGTTCCCGGAACTTCACGCTGATCCAGCTGAACGAGGAGTTATCTCCTTGAGGAGGAGCCACAATGTGATGCTCTTCTTCTGCGACGTCGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU574639 True 218 lncRNA 0.50 1 40182170 40182387

Neighbor

gene id symbol gene type direction distance location
LOC110525943 NA coding upstream 4074 40172320 ~ 40178096 (+)
LOC118965025 NA coding upstream 16556 40160164 ~ 40165614 (+)
LOC110525942 LOC106585173 coding upstream 27184 40147336 ~ 40154986 (+)
LOC110525934 LOC106580580 coding upstream 260447 39916138 ~ 39921723 (+)
LOC110525933 LOC106585165 coding upstream 280645 39882777 ~ 39901525 (+)
LOC110525945 LOC106585174 coding downstream 2784 40185171 ~ 40191808 (+)
LOC110525947 LOC106585175 coding downstream 22516 40204903 ~ 40215454 (+)
LOC110525949 LOC106585178 coding downstream 74607 40256994 ~ 40259050 (+)
LOC110525953 LOC106584961 coding downstream 104079 40286466 ~ 40309855 (+)
LOC110525028 fabpl coding downstream 132476 40314863 ~ 40317433 (+)
G506127 NA non-coding upstream 1553 40180371 ~ 40180617 (+)
G506112 NA non-coding upstream 15209 40166344 ~ 40166961 (+)
G506039 LOC108412098 non-coding upstream 119556 40061587 ~ 40062614 (+)
G506038 NA non-coding upstream 125229 40056039 ~ 40056941 (+)
G506035 NA non-coding upstream 129477 40052458 ~ 40052693 (+)
G506100 NA non-coding downstream 11445 40193832 ~ 40194236 (+)
G506096 NA non-coding downstream 12201 40194588 ~ 40196747 (+)
G506157 NA non-coding downstream 76783 40259170 ~ 40260881 (+)
G506164 LOC106584960 non-coding downstream 86898 40269285 ~ 40271231 (+)
G505988 NA other upstream 219072 39962652 ~ 39963098 (+)
LOC110525928 LOC106585161 other upstream 433690 39734703 ~ 39750180 (+)
LOC110525927 smim15 other upstream 502139 39673964 ~ 39680031 (+)
fancc fancc other upstream 870296 39269915 ~ 39312098 (+)
G499111 NA other upstream 6030433 34151140 ~ 34151737 (+)
G506095 atp5a1 other downstream 14413 40196800 ~ 40203886 (+)
G506281 LOC106585187 other downstream 362476 40544863 ~ 40547513 (+)
G506285 NA other downstream 383680 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 386339 40568637 ~ 40886427 (+)

Expression


Co-expression Network