Gene
RNA
| Item | Value |
|---|---|
| gene id | G506170 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40279385 ~ 40279614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU574681 | True | 230 | lncRNA | 0.38 | 1 | 40279385 | 40279614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525949 | LOC106585178 | coding | upstream | 20335 | 40256994 ~ 40259050 (+) |
| LOC110525947 | LOC106585175 | coding | upstream | 63931 | 40204903 ~ 40215454 (+) |
| LOC110525945 | LOC106585174 | coding | upstream | 87577 | 40185171 ~ 40191808 (+) |
| LOC110525943 | NA | coding | upstream | 101289 | 40172320 ~ 40178096 (+) |
| LOC118965025 | NA | coding | upstream | 113771 | 40160164 ~ 40165614 (+) |
| LOC110525953 | LOC106584961 | coding | downstream | 6852 | 40286466 ~ 40309855 (+) |
| LOC110525028 | fabpl | coding | downstream | 35249 | 40314863 ~ 40317433 (+) |
| LOC118965077 | NA | coding | downstream | 54725 | 40334257 ~ 40335548 (+) |
| LOC118964866 | fabpl | coding | downstream | 71798 | 40351412 ~ 40354009 (+) |
| LOC110525029 | fabpl | coding | downstream | 90551 | 40370165 ~ 40372761 (+) |
| G506169 | NA | non-coding | upstream | 79 | 40279022 ~ 40279306 (+) |
| G506167 | NA | non-coding | upstream | 5115 | 40274052 ~ 40274270 (+) |
| G506165 | LOC106584960 | non-coding | upstream | 6734 | 40271324 ~ 40272651 (+) |
| G506164 | LOC106584960 | non-coding | upstream | 8154 | 40269285 ~ 40271231 (+) |
| G506157 | NA | non-coding | upstream | 18504 | 40259170 ~ 40260881 (+) |
| G506179 | NA | non-coding | downstream | 10679 | 40290293 ~ 40290528 (+) |
| G506185 | NA | non-coding | downstream | 14234 | 40293848 ~ 40294017 (+) |
| G506186 | NA | non-coding | downstream | 16313 | 40295927 ~ 40296218 (+) |
| G506187 | NA | non-coding | downstream | 17406 | 40297020 ~ 40297225 (+) |
| G506192 | NA | non-coding | downstream | 25232 | 40304846 ~ 40305055 (+) |
| G506095 | atp5a1 | other | upstream | 75499 | 40196800 ~ 40203886 (+) |
| G505988 | NA | other | upstream | 316287 | 39962652 ~ 39963098 (+) |
| LOC110525928 | LOC106585161 | other | upstream | 530905 | 39734703 ~ 39750180 (+) |
| LOC110525927 | smim15 | other | upstream | 599354 | 39673964 ~ 39680031 (+) |
| G506281 | LOC106585187 | other | downstream | 265249 | 40544863 ~ 40547513 (+) |
| G506285 | NA | other | downstream | 286453 | 40566067 ~ 40566429 (+) |
| fbxl17 | fbxl17 | other | downstream | 289112 | 40568637 ~ 40886427 (+) |
| G507768 | LOC105030512 | other | downstream | 1189937 | 41469551 ~ 41471408 (+) |
| G508559 | dph7 | other | downstream | 1849611 | 42129225 ~ 42131940 (+) |
