G506185


Basic Information

Item Value
gene id G506185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 40293848 ~ 40294017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574696
GTCTCCGTCGGTCCTTGCTTAGTGGGCTGTGGTGTGCCTTCTCATTACTTTCCTCTACATATGAGACAACCTTTAAAGCGtaaatcccccccccaaaaaaaaatcttAATTCTTAATTCTTACAGCACTTTTATTAATTTCAAAGTCTCTCATTAGATGAGATTACTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU574696 True 170 lncRNA 0.38 1 40293848 40294017

Neighbor

gene id symbol gene type direction distance location
LOC110525949 LOC106585178 coding upstream 34798 40256994 ~ 40259050 (+)
LOC110525947 LOC106585175 coding upstream 78394 40204903 ~ 40215454 (+)
LOC110525945 LOC106585174 coding upstream 102040 40185171 ~ 40191808 (+)
LOC110525943 NA coding upstream 115752 40172320 ~ 40178096 (+)
LOC118965025 NA coding upstream 128234 40160164 ~ 40165614 (+)
LOC110525028 fabpl coding downstream 20846 40314863 ~ 40317433 (+)
LOC118965077 NA coding downstream 40322 40334257 ~ 40335548 (+)
LOC118964866 fabpl coding downstream 57395 40351412 ~ 40354009 (+)
LOC110525029 fabpl coding downstream 76148 40370165 ~ 40372761 (+)
LOC110526900 fabpl coding downstream 120850 40414867 ~ 40417444 (+)
G506179 NA non-coding upstream 3320 40290293 ~ 40290528 (+)
G506170 NA non-coding upstream 14234 40279385 ~ 40279614 (+)
G506169 NA non-coding upstream 14542 40279022 ~ 40279306 (+)
G506167 NA non-coding upstream 19578 40274052 ~ 40274270 (+)
G506165 LOC106584960 non-coding upstream 21197 40271324 ~ 40272651 (+)
G506186 NA non-coding downstream 1910 40295927 ~ 40296218 (+)
G506187 NA non-coding downstream 3003 40297020 ~ 40297225 (+)
G506192 NA non-coding downstream 10829 40304846 ~ 40305055 (+)
G506194 NA non-coding downstream 13463 40307480 ~ 40307710 (+)
G506195 NA non-coding downstream 16751 40310768 ~ 40311208 (+)
G506095 atp5a1 other upstream 89962 40196800 ~ 40203886 (+)
G505988 NA other upstream 330750 39962652 ~ 39963098 (+)
LOC110525928 LOC106585161 other upstream 545368 39734703 ~ 39750180 (+)
LOC110525927 smim15 other upstream 613817 39673964 ~ 39680031 (+)
G506281 LOC106585187 other downstream 250846 40544863 ~ 40547513 (+)
G506285 NA other downstream 272050 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 274709 40568637 ~ 40886427 (+)
G507768 LOC105030512 other downstream 1175534 41469551 ~ 41471408 (+)
G508559 dph7 other downstream 1835208 42129225 ~ 42131940 (+)

Expression


Co-expression Network