Gene
RNA
| Item | Value |
|---|---|
| gene id | G506280 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40540501 ~ 40540903 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU574814 | True | 403 | lncRNA | 0.39 | 1 | 40540501 | 40540903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc35d2 | LOC106585185 | coding | upstream | 6657 | 40527838 ~ 40533844 (+) |
| ccl27a | ccl28 | coding | upstream | 16219 | 40520974 ~ 40524282 (+) |
| avp | neu4 | coding | upstream | 20962 | 40517591 ~ 40519539 (+) |
| LOC110525959 | LOC106585184 | coding | upstream | 34389 | 40500657 ~ 40506112 (+) |
| LOC110525957 | LOC106585182 | coding | upstream | 50649 | 40476037 ~ 40489852 (+) |
| fbxl17 | fbxl17 | coding | downstream | 27734 | 40568637 ~ 40886427 (+) |
| efna5b | LOC106585191 | coding | downstream | 434476 | 40975379 ~ 41084448 (+) |
| LOC110525969 | NA | coding | downstream | 641945 | 41182848 ~ 41188172 (+) |
| LOC110525974 | selenop | coding | downstream | 917384 | 41458287 ~ 41461918 (+) |
| LOC118964869 | NA | coding | downstream | 974836 | 41515545 ~ 41522572 (+) |
| G506247 | NA | non-coding | upstream | 47269 | 40492027 ~ 40493232 (+) |
| G506248 | NA | non-coding | upstream | 48733 | 40491346 ~ 40491768 (+) |
| G506249 | NA | non-coding | upstream | 49583 | 40490578 ~ 40490918 (+) |
| G506281 | LOC106585187 | non-coding | downstream | 5410 | 40544863 ~ 40547513 (+) |
| G506336 | NA | non-coding | downstream | 96930 | 40637833 ~ 40639089 (+) |
| G506382 | NA | non-coding | downstream | 159157 | 40700060 ~ 40700389 (+) |
| G506417 | NA | non-coding | downstream | 223586 | 40764489 ~ 40766041 (+) |
| G506471 | NA | non-coding | downstream | 320187 | 40861090 ~ 40940073 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 281451 | 40256994 ~ 40259050 (+) |
| G506095 | atp5a1 | other | upstream | 336615 | 40196800 ~ 40203886 (+) |
| G505988 | NA | other | upstream | 577403 | 39962652 ~ 39963098 (+) |
| LOC110525928 | LOC106585161 | other | upstream | 792021 | 39734703 ~ 39750180 (+) |
| LOC110525927 | smim15 | other | upstream | 860470 | 39673964 ~ 39680031 (+) |
| G506285 | NA | other | downstream | 25164 | 40566067 ~ 40566429 (+) |
| G507768 | LOC105030512 | other | downstream | 928648 | 41469551 ~ 41471408 (+) |
| G508559 | dph7 | other | downstream | 1588322 | 42129225 ~ 42131940 (+) |
