Gene
RNA
| Item | Value |
|---|---|
| gene id | G506471 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40861090 ~ 40940073 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU575020 | True | 272 | lncRNA | 0.50 | 2 | 40861090 | 40940073 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc35d2 | LOC106585185 | coding | upstream | 327246 | 40527838 ~ 40533844 (+) |
| ccl27a | ccl28 | coding | upstream | 336808 | 40520974 ~ 40524282 (+) |
| avp | neu4 | coding | upstream | 341551 | 40517591 ~ 40519539 (+) |
| LOC110525959 | LOC106585184 | coding | upstream | 354978 | 40500657 ~ 40506112 (+) |
| LOC110525957 | LOC106585182 | coding | upstream | 371238 | 40476037 ~ 40489852 (+) |
| efna5b | LOC106585191 | coding | downstream | 35306 | 40975379 ~ 41084448 (+) |
| LOC110525969 | NA | coding | downstream | 242775 | 41182848 ~ 41188172 (+) |
| LOC110525974 | selenop | coding | downstream | 518214 | 41458287 ~ 41461918 (+) |
| LOC118964869 | NA | coding | downstream | 575666 | 41515545 ~ 41522572 (+) |
| oxct1a | LOC106580620 | coding | downstream | 630931 | 41571004 ~ 41677673 (+) |
| G506417 | NA | non-coding | upstream | 95049 | 40764489 ~ 40766041 (+) |
| G506382 | NA | non-coding | upstream | 160701 | 40700060 ~ 40700389 (+) |
| G506336 | NA | non-coding | upstream | 222001 | 40637833 ~ 40639089 (+) |
| G506281 | LOC106585187 | non-coding | upstream | 313577 | 40544863 ~ 40547513 (+) |
| G506280 | NA | non-coding | upstream | 320187 | 40540501 ~ 40540903 (+) |
| G506531 | NA | non-coding | downstream | 8602 | 40948675 ~ 40948992 (+) |
| G506526 | NA | non-coding | downstream | 144418 | 41084491 ~ 41086322 (+) |
| G506524 | NA | non-coding | downstream | 146344 | 41086417 ~ 41088951 (+) |
| G506602 | NA | non-coding | downstream | 149826 | 41089899 ~ 41090182 (+) |
| G506622 | NA | non-coding | downstream | 178991 | 41119064 ~ 41119403 (+) |
| fbxl17 | fbxl17 | other | upstream | 1568 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 294661 | 40566067 ~ 40566429 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 602040 | 40256994 ~ 40259050 (+) |
| G506095 | atp5a1 | other | upstream | 657204 | 40196800 ~ 40203886 (+) |
| G507768 | LOC105030512 | other | downstream | 529478 | 41469551 ~ 41471408 (+) |
| G508559 | dph7 | other | downstream | 1189152 | 42129225 ~ 42131940 (+) |
| G509160 | NA | other | downstream | 1627032 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 2717395 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 4244366 | 45184439 ~ 45185869 (+) |
