Gene
RNA
| Item | Value |
|---|---|
| gene id | G507632 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 41271902 ~ 41272129 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU576271 | True | 228 | lncRNA | 0.36 | 1 | 41271902 | 41272129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525969 | NA | coding | upstream | 83730 | 41182848 ~ 41188172 (+) |
| efna5b | LOC106585191 | coding | upstream | 187454 | 40975379 ~ 41084448 (+) |
| fbxl17 | fbxl17 | coding | upstream | 385475 | 40568637 ~ 40886427 (+) |
| slc35d2 | LOC106585185 | coding | upstream | 738058 | 40527838 ~ 40533844 (+) |
| ccl27a | ccl28 | coding | upstream | 747620 | 40520974 ~ 40524282 (+) |
| LOC110525974 | selenop | coding | downstream | 186158 | 41458287 ~ 41461918 (+) |
| LOC118964869 | NA | coding | downstream | 243610 | 41515545 ~ 41522572 (+) |
| oxct1a | LOC106580620 | coding | downstream | 298875 | 41571004 ~ 41677673 (+) |
| plcxd3 | plcxd3 | coding | downstream | 406644 | 41678773 ~ 41700121 (+) |
| c7a | c7-2 | coding | downstream | 451044 | 41723173 ~ 41729381 (+) |
| G506635 | NA | non-coding | upstream | 132562 | 41139119 ~ 41139340 (+) |
| G506627 | NA | non-coding | upstream | 147413 | 41124282 ~ 41124489 (+) |
| G506622 | NA | non-coding | upstream | 152499 | 41119064 ~ 41119403 (+) |
| G506602 | NA | non-coding | upstream | 181720 | 41089899 ~ 41090182 (+) |
| G506524 | NA | non-coding | upstream | 182951 | 41086417 ~ 41088951 (+) |
| G507634 | NA | non-coding | downstream | 1535 | 41273664 ~ 41273958 (+) |
| G507636 | NA | non-coding | downstream | 2966 | 41275095 ~ 41275435 (+) |
| G507637 | NA | non-coding | downstream | 4159 | 41276288 ~ 41276523 (+) |
| G507699 | NA | non-coding | downstream | 160007 | 41432136 ~ 41433278 (+) |
| G507771 | LOC106585200 | non-coding | downstream | 206956 | 41479085 ~ 41479316 (+) |
| G506285 | NA | other | upstream | 705473 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 724389 | 40544863 ~ 40547513 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 1012852 | 40256994 ~ 40259050 (+) |
| G506095 | atp5a1 | other | upstream | 1068016 | 40196800 ~ 40203886 (+) |
| G507768 | LOC105030512 | other | downstream | 197422 | 41469551 ~ 41471408 (+) |
| G508559 | dph7 | other | downstream | 857096 | 42129225 ~ 42131940 (+) |
| G509160 | NA | other | downstream | 1294976 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 2385339 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 3912310 | 45184439 ~ 45185869 (+) |
