G507636


Basic Information

Item Value
gene id G507636
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41275095 ~ 41275435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU576275
gttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctaaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtgg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU576275 True 341 lncRNA 0.43 1 41275095 41275435

Neighbor

gene id symbol gene type direction distance location
LOC110525969 NA coding upstream 86923 41182848 ~ 41188172 (+)
efna5b LOC106585191 coding upstream 190647 40975379 ~ 41084448 (+)
fbxl17 fbxl17 coding upstream 388668 40568637 ~ 40886427 (+)
slc35d2 LOC106585185 coding upstream 741251 40527838 ~ 40533844 (+)
ccl27a ccl28 coding upstream 750813 40520974 ~ 40524282 (+)
LOC110525974 selenop coding downstream 182852 41458287 ~ 41461918 (+)
LOC118964869 NA coding downstream 240304 41515545 ~ 41522572 (+)
oxct1a LOC106580620 coding downstream 295569 41571004 ~ 41677673 (+)
plcxd3 plcxd3 coding downstream 403338 41678773 ~ 41700121 (+)
c7a c7-2 coding downstream 447738 41723173 ~ 41729381 (+)
G507634 NA non-coding upstream 1137 41273664 ~ 41273958 (+)
G507632 NA non-coding upstream 2966 41271902 ~ 41272129 (+)
G506635 NA non-coding upstream 135755 41139119 ~ 41139340 (+)
G506627 NA non-coding upstream 150606 41124282 ~ 41124489 (+)
G506622 NA non-coding upstream 155692 41119064 ~ 41119403 (+)
G507637 NA non-coding downstream 853 41276288 ~ 41276523 (+)
G507699 NA non-coding downstream 156701 41432136 ~ 41433278 (+)
G507771 LOC106585200 non-coding downstream 203650 41479085 ~ 41479316 (+)
G507773 NA non-coding downstream 205911 41481346 ~ 41481658 (+)
G507777 NA non-coding downstream 211064 41486499 ~ 41486763 (+)
G506285 NA other upstream 708666 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 727582 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1016045 40256994 ~ 40259050 (+)
G506095 atp5a1 other upstream 1071209 40196800 ~ 40203886 (+)
G507768 LOC105030512 other downstream 194116 41469551 ~ 41471408 (+)
G508559 dph7 other downstream 853790 42129225 ~ 42131940 (+)
G509160 NA other downstream 1291670 42567105 ~ 42570169 (+)
G510416 NA other downstream 2382033 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3909004 45184439 ~ 45185869 (+)

Expression


Co-expression Network