G507768 (LOC105030512)


Basic Information

Item Value
gene id G507768
gene name LOC105030512
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41469551 ~ 41471408 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU576412
CGCCAACTTAAGCATGAGAAACCCGTCGAACATCAAGCCCCTTGAACCAGATCCTGTCAAATGATGTCAAGCATGCTGTATAGCCAATATCATCACTAGCCAATCAACgtcaagcaaacaaacaaaacctGAGCCAGTGGAACATTTTGCAACTAAAACTAGAGTTTATAATGGACAAACTGAGGTAAATCCCTCCCCGTTCGCAACAGAAACAGCGTAATGATTTAAAAGTCACTATAGCCCCCTTCCTCGTCTCTCTTTTAATGTCAACATATGAAAATGTTAAGATGTCTTTGACACAAATGACATGGGATTGTAGAAAAGCAAAAGACAATATAGGGTTTAGTTACAGCAAGATATTGGCTTATGTCTTGAAATAATACTTGTACTACTGTATCTATACTGTATGACCATATACAAAATACTCTGTAGGAATGTTTCTTATAGGCTGATCAACACACACATTATCTTATCTTTCTGGTGAATATCAAGGCAATATTGTAAAGAATGTCATTGAAGCTTATTGATAGGTTTCTCCCTGTCCAAttcttataaactcagcaaaaaaagaaacatccctttttcaggatcctgtcttttaaagataattcgtaaaaatccaaataacttcacagatcttcattgtaaagggtttaaacactgtttcccatgcttgttcaatgaaccataaacaattaataaacatgaacctgtggaacggtcgttaagacactaacacttggacggtaggcaattaaagtcCCAGTTATGAAAatcttaggacactaaaagaggcctttctactgactctgaaaaacaccaaaagaaatatggccagggtccctgctcatctgtgtgaacgtgccttaggcatgctgcaaggaggcatgaagactgcagatgtggccaggacaataaattgcaatgttcgtactgtgagaagacagcgctacagggagacaggacggacagctgatcgttctcgcagtggcagaccacgtgtaacaacacctgcacaggatcggtacatccaaacatcacacctgcgggacaggtacaggatggcaacaacaactgcccgagttacaccagaaatgcacaatccctccatcagtgcttagaTTGTCTACAAtatgctgagagaggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacatcaccggcaacaacgtcacctatgggcacaaacccaccgtcgctggaccagacaggactggcaaaaagtgctcttcactgacgagtcgtggttttgtctcaccagaggtgatggtcggattcgcatttatcgtccaaggaatgagcgttacaccgaggcctgtactctggagcgggatcgatttggaggtggagggtgtgtcatggtctggggcggtgtgtcacagcatcatcggactaagcttgttgtcattgcaggcaatctcaatgctgtgcattacagggaagacatcctcctccctcatgtggtagccttcctgacatgaccctccagcatgacaatgccaccagccatactgctcgtcctgtgtgtgatttcctgcaagacaggaatgttacgtgttctgccatggccagcgaagagcctggttCTCAATCCCATTGCGcacttctgggacctgttggatcggagggtgaaggatagggccatttcccccaatgtctgggaacttgcaggtgccttggttgaAGAGTGGGGTAATATCTCACAGTAAGAACTGCCACAGATGGTGCAGTCAAAGAGAAGGAGATGCATTGCAGTACTTaacgcagctggtggccacaccaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU576412 True 1823 TUCP 0.45 2 41469551 41471408

Neighbor

gene id symbol gene type direction distance location
LOC110525974 selenop coding upstream 7633 41458287 ~ 41461918 (+)
LOC110525969 NA coding upstream 281379 41182848 ~ 41188172 (+)
efna5b LOC106585191 coding upstream 385103 40975379 ~ 41084448 (+)
fbxl17 fbxl17 coding upstream 583124 40568637 ~ 40886427 (+)
slc35d2 LOC106585185 coding upstream 935707 40527838 ~ 40533844 (+)
LOC118964869 NA coding downstream 44331 41515545 ~ 41522572 (+)
oxct1a LOC106580620 coding downstream 99596 41571004 ~ 41677673 (+)
plcxd3 plcxd3 coding downstream 207365 41678773 ~ 41700121 (+)
c7a c7-2 coding downstream 251765 41723173 ~ 41729381 (+)
LOC118964870 NA coding downstream 283271 41754679 ~ 41757203 (+)
G507699 NA non-coding upstream 36273 41432136 ~ 41433278 (+)
G507637 NA non-coding upstream 193028 41276288 ~ 41276523 (+)
G507636 NA non-coding upstream 194116 41275095 ~ 41275435 (+)
G507634 NA non-coding upstream 195593 41273664 ~ 41273958 (+)
G507632 NA non-coding upstream 197422 41271902 ~ 41272129 (+)
G507771 LOC106585200 non-coding downstream 7677 41479085 ~ 41479316 (+)
G507773 NA non-coding downstream 9938 41481346 ~ 41481658 (+)
G507777 NA non-coding downstream 15091 41486499 ~ 41486763 (+)
G507782 NA non-coding downstream 19545 41490953 ~ 41491220 (+)
G507783 NA non-coding downstream 20924 41492332 ~ 41492575 (+)
G506285 NA other upstream 903122 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 922038 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1210501 40256994 ~ 40259050 (+)
G506095 atp5a1 other upstream 1265665 40196800 ~ 40203886 (+)
G508559 dph7 other downstream 657817 42129225 ~ 42131940 (+)
G509160 NA other downstream 1095697 42567105 ~ 42570169 (+)
G510416 NA other downstream 2186060 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3713031 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3746319 45187119 ~ 45236944 (+)

Expression


Co-expression Network