G507771 (LOC106585200)


Basic Information

Item Value
gene id G507771
gene name LOC106585200
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41479085 ~ 41479316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU576415
CTGAGGGTGTGAGAGCAGCCATGGTTTGTGCAGTGGTTGTTGTGACCCAGGCTCAGCAGTCTCTGTGTGTCCGAGCTCTGGTTGTCCTCCTTCTCCCCAGGCTCAGATTCGTCTGCGTCCAGCTCGGTGAACTCCATCCAGGGCTCGTCCTGGTACAGGTCAGGGGGGTAGGGGTGGAGACCCCCCATGCCACCAACACTCAGGAGGAAGTTCAGCTCATTCAGCTTTCGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU576415 True 232 lncRNA 0.59 1 41479085 41479316

Neighbor

gene id symbol gene type direction distance location
LOC110525974 selenop coding upstream 17167 41458287 ~ 41461918 (+)
LOC110525969 NA coding upstream 290913 41182848 ~ 41188172 (+)
efna5b LOC106585191 coding upstream 394637 40975379 ~ 41084448 (+)
fbxl17 fbxl17 coding upstream 592658 40568637 ~ 40886427 (+)
slc35d2 LOC106585185 coding upstream 945241 40527838 ~ 40533844 (+)
LOC118964869 NA coding downstream 36423 41515545 ~ 41522572 (+)
oxct1a LOC106580620 coding downstream 91688 41571004 ~ 41677673 (+)
plcxd3 plcxd3 coding downstream 199457 41678773 ~ 41700121 (+)
c7a c7-2 coding downstream 243857 41723173 ~ 41729381 (+)
LOC118964870 NA coding downstream 275363 41754679 ~ 41757203 (+)
G507699 NA non-coding upstream 45807 41432136 ~ 41433278 (+)
G507637 NA non-coding upstream 202562 41276288 ~ 41276523 (+)
G507636 NA non-coding upstream 203650 41275095 ~ 41275435 (+)
G507634 NA non-coding upstream 205127 41273664 ~ 41273958 (+)
G507632 NA non-coding upstream 206956 41271902 ~ 41272129 (+)
G507773 NA non-coding downstream 2030 41481346 ~ 41481658 (+)
G507777 NA non-coding downstream 7183 41486499 ~ 41486763 (+)
G507782 NA non-coding downstream 11637 41490953 ~ 41491220 (+)
G507783 NA non-coding downstream 13016 41492332 ~ 41492575 (+)
G507784 NA non-coding downstream 13630 41492946 ~ 41493261 (+)
G507768 LOC105030512 other upstream 7677 41469551 ~ 41471408 (+)
G506285 NA other upstream 912656 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 931572 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1220035 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 649909 42129225 ~ 42131940 (+)
G509160 NA other downstream 1087789 42567105 ~ 42570169 (+)
G510416 NA other downstream 2178152 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3705123 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3738411 45187119 ~ 45236944 (+)

Expression


Co-expression Network