G507786



Basic Information


Item Value
gene id G507786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41494035 ~ 41494258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU576430
gagtcctttaggtgccttttggcaccTTTATGGgtctttactgaagagtggcgtccatcttgccactctaccctaaaggcctgattggtggagtgctgctgagatggttgtccttctgtaaggaactctggagcgctgtcagagtgaccatcgggttcttggtcacctccctgactaaagcTCTTCTCCCACGCTCAGTTTgcccaactctaggaagagtcttg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU576430 True 224 lncRNA 0.52 1 41494035 41494258
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110525974 selenop coding upstream 32117 41458287 ~ 41461918 (+)
LOC110525969 NA coding upstream 305863 41182848 ~ 41188172 (+)
efna5b LOC106585191 coding upstream 409587 40975379 ~ 41084448 (+)
fbxl17 fbxl17 coding upstream 607608 40568637 ~ 40886427 (+)
slc35d2 LOC106585185 coding upstream 960191 40527838 ~ 40533844 (+)
LOC118964869 NA coding downstream 21481 41515545 ~ 41522572 (+)
oxct1a LOC106580620 coding downstream 76746 41571004 ~ 41677673 (+)
plcxd3 plcxd3 coding downstream 184515 41678773 ~ 41700121 (+)
c7a c7-2 coding downstream 228915 41723173 ~ 41729381 (+)
LOC118964870 NA coding downstream 260421 41754679 ~ 41757203 (+)
G507785 NA non-coding upstream 312 41493409 ~ 41493723 (+)
G507784 NA non-coding upstream 774 41492946 ~ 41493261 (+)
G507783 NA non-coding upstream 1460 41492332 ~ 41492575 (+)
G507782 NA non-coding upstream 2815 41490953 ~ 41491220 (+)
G507777 NA non-coding upstream 7272 41486499 ~ 41486763 (+)
G507788 NA non-coding downstream 1209 41495467 ~ 41495792 (+)
G507790 NA non-coding downstream 2129 41496387 ~ 41496737 (+)
G507794 NA non-coding downstream 5302 41499560 ~ 41500021 (+)
G507797 NA non-coding downstream 11643 41505901 ~ 41506178 (+)
G507768 LOC105030512 other upstream 22627 41469551 ~ 41471408 (+)
G506285 NA other upstream 927606 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 946522 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1234985 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 634967 42129225 ~ 42131940 (+)
G509160 NA other downstream 1072847 42567105 ~ 42570169 (+)
G510416 NA other downstream 2163210 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3690181 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3723469 45187119 ~ 45236944 (+)

Expression


G507786 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G507786 Expression in each Bioproject

Bar chart with 9 bars.
G507786 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
End of interactive chart.

Co-expression Network