Gene
RNA
| Item | Value |
|---|---|
| gene id | G508301 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 41820139 ~ 41820424 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577031 | True | 286 | lncRNA | 0.42 | 1 | 41820139 | 41820424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| htr1aa | LOC106585208 | coding | upstream | 46184 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 62936 | 41754679 ~ 41757203 (+) |
| c7a | c7-2 | coding | upstream | 90758 | 41723173 ~ 41729381 (+) |
| plcxd3 | plcxd3 | coding | upstream | 120018 | 41678773 ~ 41700121 (+) |
| oxct1a | LOC106580620 | coding | upstream | 142466 | 41571004 ~ 41677673 (+) |
| paxx | ci142 | coding | downstream | 316629 | 42137053 ~ 42143608 (+) |
| LOC110525988 | LOC106584966 | coding | downstream | 424081 | 42244505 ~ 42249266 (+) |
| stxbp1b | LOC106585214 | coding | downstream | 552107 | 42372531 ~ 42415108 (+) |
| camsap1b | LOC106585218 | coding | downstream | 782884 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 825610 | 42646034 ~ 42655499 (+) |
| G508300 | NA | non-coding | upstream | 89 | 41819783 ~ 41820050 (+) |
| G508104 | NA | non-coding | upstream | 62306 | 41757231 ~ 41757833 (+) |
| G507747 | NA | non-coding | upstream | 262563 | 41553432 ~ 41557576 (+) |
| LOC118964869 | NA | non-coding | upstream | 297572 | 41515545 ~ 41522572 (+) |
| G507797 | NA | non-coding | upstream | 313961 | 41505901 ~ 41506178 (+) |
| G508312 | NA | non-coding | downstream | 6428 | 41826852 ~ 41827335 (+) |
| G508355 | NA | non-coding | downstream | 39160 | 41859584 ~ 41859819 (+) |
| G508450 | NA | non-coding | downstream | 172359 | 41992783 ~ 41992996 (+) |
| G508451 | NA | non-coding | downstream | 172625 | 41993049 ~ 41993275 (+) |
| G508453 | NA | non-coding | downstream | 174433 | 41994857 ~ 41995269 (+) |
| G507768 | LOC105030512 | other | upstream | 348731 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 960617 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1253710 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 1272626 | 40544863 ~ 40547513 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 1561089 | 40256994 ~ 40259050 (+) |
| G508559 | dph7 | other | downstream | 308801 | 42129225 ~ 42131940 (+) |
| G509160 | NA | other | downstream | 746681 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1837044 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 3364015 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 3397303 | 45187119 ~ 45236944 (+) |
