Gene
RNA
| Item | Value |
|---|---|
| gene id | G508355 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 41859584 ~ 41859819 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577085 | True | 236 | lncRNA | 0.35 | 1 | 41859584 | 41859819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| htr1aa | LOC106585208 | coding | upstream | 85629 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 102381 | 41754679 ~ 41757203 (+) |
| c7a | c7-2 | coding | upstream | 130203 | 41723173 ~ 41729381 (+) |
| plcxd3 | plcxd3 | coding | upstream | 159463 | 41678773 ~ 41700121 (+) |
| oxct1a | LOC106580620 | coding | upstream | 181911 | 41571004 ~ 41677673 (+) |
| paxx | ci142 | coding | downstream | 277234 | 42137053 ~ 42143608 (+) |
| LOC110525988 | LOC106584966 | coding | downstream | 384686 | 42244505 ~ 42249266 (+) |
| stxbp1b | LOC106585214 | coding | downstream | 512712 | 42372531 ~ 42415108 (+) |
| camsap1b | LOC106585218 | coding | downstream | 743489 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 786215 | 42646034 ~ 42655499 (+) |
| G508312 | NA | non-coding | upstream | 32249 | 41826852 ~ 41827335 (+) |
| G508301 | NA | non-coding | upstream | 39160 | 41820139 ~ 41820424 (+) |
| G508300 | NA | non-coding | upstream | 39534 | 41819783 ~ 41820050 (+) |
| G508104 | NA | non-coding | upstream | 101751 | 41757231 ~ 41757833 (+) |
| G507747 | NA | non-coding | upstream | 302008 | 41553432 ~ 41557576 (+) |
| G508450 | NA | non-coding | downstream | 132964 | 41992783 ~ 41992996 (+) |
| G508451 | NA | non-coding | downstream | 133230 | 41993049 ~ 41993275 (+) |
| G508453 | NA | non-coding | downstream | 135038 | 41994857 ~ 41995269 (+) |
| G508462 | NA | non-coding | downstream | 146813 | 42006632 ~ 42006858 (+) |
| G508463 | NA | non-coding | downstream | 147178 | 42006997 ~ 42007228 (+) |
| G507768 | LOC105030512 | other | upstream | 388176 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1000062 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1293155 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 1312071 | 40544863 ~ 40547513 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 1600534 | 40256994 ~ 40259050 (+) |
| G508559 | dph7 | other | downstream | 269406 | 42129225 ~ 42131940 (+) |
| G509160 | NA | other | downstream | 707286 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1797649 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 3324620 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 3357908 | 45187119 ~ 45236944 (+) |
