G508453


Basic Information

Item Value
gene id G508453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41994857 ~ 41995269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577185
ctatgtccattgatcatccatgagatgtttctacaacttgattggcatCCACCTgggataaattcaattgattgaacatgatctggaaaggcacacgcctgtctatataaaagtcccacagttgacagtgcatgtcagagcagaaaccaagccatgaggtcgaagaaattgtccgtagagctctgagacagaattgtgtcgaggcacagacttaaggaagggtaccaaaacatttatgcaacattgaaggtccctaagaacacagtgacctccatcattcttaaattgaagaagtttggaaacaccaagactcttcttggagctggcctcccggccaaaatgagcaatctggggagaagggccttggttaggttggtgaccaagaacccaaccCAAAAACctaatgggagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577185 True 413 lncRNA 0.45 1 41994857 41995269

Neighbor

gene id symbol gene type direction distance location
htr1aa LOC106585208 coding upstream 220902 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 237654 41754679 ~ 41757203 (+)
c7a c7-2 coding upstream 265476 41723173 ~ 41729381 (+)
plcxd3 plcxd3 coding upstream 294736 41678773 ~ 41700121 (+)
oxct1a LOC106580620 coding upstream 317184 41571004 ~ 41677673 (+)
paxx ci142 coding downstream 141784 42137053 ~ 42143608 (+)
LOC110525988 LOC106584966 coding downstream 249236 42244505 ~ 42249266 (+)
stxbp1b LOC106585214 coding downstream 377262 42372531 ~ 42415108 (+)
camsap1b LOC106585218 coding downstream 608039 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 650765 42646034 ~ 42655499 (+)
G508451 NA non-coding upstream 1582 41993049 ~ 41993275 (+)
G508450 NA non-coding upstream 1861 41992783 ~ 41992996 (+)
G508355 NA non-coding upstream 135038 41859584 ~ 41859819 (+)
G508312 NA non-coding upstream 167522 41826852 ~ 41827335 (+)
G508301 NA non-coding upstream 174433 41820139 ~ 41820424 (+)
G508462 NA non-coding downstream 11363 42006632 ~ 42006858 (+)
G508463 NA non-coding downstream 11728 42006997 ~ 42007228 (+)
G508465 NA non-coding downstream 14854 42010123 ~ 42010338 (+)
G508469 NA non-coding downstream 20877 42016146 ~ 42016382 (+)
G508470 NA non-coding downstream 21381 42016650 ~ 42016886 (+)
G507768 LOC105030512 other upstream 523449 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1135335 40568637 ~ 40886427 (+)
G506285 NA other upstream 1428428 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1447344 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1735807 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 133956 42129225 ~ 42131940 (+)
G509160 NA other downstream 571836 42567105 ~ 42570169 (+)
G510416 NA other downstream 1662199 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3189170 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3222458 45187119 ~ 45236944 (+)

Expression


Co-expression Network