Gene
RNA
| Item | Value |
|---|---|
| gene id | G508469 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42016146 ~ 42016382 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577202 | True | 237 | lncRNA | 0.39 | 1 | 42016146 | 42016382 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| htr1aa | LOC106585208 | coding | upstream | 242191 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 258943 | 41754679 ~ 41757203 (+) |
| c7a | c7-2 | coding | upstream | 286765 | 41723173 ~ 41729381 (+) |
| plcxd3 | plcxd3 | coding | upstream | 316025 | 41678773 ~ 41700121 (+) |
| oxct1a | LOC106580620 | coding | upstream | 338473 | 41571004 ~ 41677673 (+) |
| paxx | ci142 | coding | downstream | 120671 | 42137053 ~ 42143608 (+) |
| LOC110525988 | LOC106584966 | coding | downstream | 228123 | 42244505 ~ 42249266 (+) |
| stxbp1b | LOC106585214 | coding | downstream | 356149 | 42372531 ~ 42415108 (+) |
| camsap1b | LOC106585218 | coding | downstream | 586926 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 629652 | 42646034 ~ 42655499 (+) |
| G508465 | NA | non-coding | upstream | 5808 | 42010123 ~ 42010338 (+) |
| G508463 | NA | non-coding | upstream | 8918 | 42006997 ~ 42007228 (+) |
| G508462 | NA | non-coding | upstream | 9288 | 42006632 ~ 42006858 (+) |
| G508453 | NA | non-coding | upstream | 20877 | 41994857 ~ 41995269 (+) |
| G508451 | NA | non-coding | upstream | 22871 | 41993049 ~ 41993275 (+) |
| G508470 | NA | non-coding | downstream | 268 | 42016650 ~ 42016886 (+) |
| G508471 | NA | non-coding | downstream | 619 | 42017001 ~ 42017227 (+) |
| G508473 | NA | non-coding | downstream | 4710 | 42021092 ~ 42021307 (+) |
| G508474 | NA | non-coding | downstream | 5044 | 42021426 ~ 42021768 (+) |
| G508481 | NA | non-coding | downstream | 17529 | 42033911 ~ 42034557 (+) |
| G507768 | LOC105030512 | other | upstream | 544738 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1156624 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1449717 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 1468633 | 40544863 ~ 40547513 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 1757096 | 40256994 ~ 40259050 (+) |
| G508559 | dph7 | other | downstream | 112843 | 42129225 ~ 42131940 (+) |
| G509160 | NA | other | downstream | 550723 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1641086 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 3168057 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 3201345 | 45187119 ~ 45236944 (+) |
