Gene
RNA
| Item | Value |
|---|---|
| gene id | G508471 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42017001 ~ 42017227 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU577204 | True | 227 | lncRNA | 0.48 | 1 | 42017001 | 42017227 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| htr1aa | LOC106585208 | coding | upstream | 243046 | 41771717 ~ 41773955 (+) |
| LOC118964870 | NA | coding | upstream | 259798 | 41754679 ~ 41757203 (+) |
| c7a | c7-2 | coding | upstream | 287620 | 41723173 ~ 41729381 (+) |
| plcxd3 | plcxd3 | coding | upstream | 316880 | 41678773 ~ 41700121 (+) |
| oxct1a | LOC106580620 | coding | upstream | 339328 | 41571004 ~ 41677673 (+) |
| paxx | ci142 | coding | downstream | 119826 | 42137053 ~ 42143608 (+) |
| LOC110525988 | LOC106584966 | coding | downstream | 227278 | 42244505 ~ 42249266 (+) |
| stxbp1b | LOC106585214 | coding | downstream | 355304 | 42372531 ~ 42415108 (+) |
| camsap1b | LOC106585218 | coding | downstream | 586081 | 42603308 ~ 42645904 (+) |
| LOC110525996 | LOC106585219 | coding | downstream | 628807 | 42646034 ~ 42655499 (+) |
| G508470 | NA | non-coding | upstream | 115 | 42016650 ~ 42016886 (+) |
| G508469 | NA | non-coding | upstream | 619 | 42016146 ~ 42016382 (+) |
| G508465 | NA | non-coding | upstream | 6663 | 42010123 ~ 42010338 (+) |
| G508463 | NA | non-coding | upstream | 9773 | 42006997 ~ 42007228 (+) |
| G508462 | NA | non-coding | upstream | 10143 | 42006632 ~ 42006858 (+) |
| G508473 | NA | non-coding | downstream | 3865 | 42021092 ~ 42021307 (+) |
| G508474 | NA | non-coding | downstream | 4199 | 42021426 ~ 42021768 (+) |
| G508481 | NA | non-coding | downstream | 16684 | 42033911 ~ 42034557 (+) |
| G508484 | NA | non-coding | downstream | 20452 | 42037679 ~ 42037927 (+) |
| G508497 | NA | non-coding | downstream | 34768 | 42051995 ~ 42052214 (+) |
| G507768 | LOC105030512 | other | upstream | 545593 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1157479 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 1450572 | 40566067 ~ 40566429 (+) |
| G506281 | LOC106585187 | other | upstream | 1469488 | 40544863 ~ 40547513 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 1757951 | 40256994 ~ 40259050 (+) |
| G508559 | dph7 | other | downstream | 111998 | 42129225 ~ 42131940 (+) |
| G509160 | NA | other | downstream | 549878 | 42567105 ~ 42570169 (+) |
| G510416 | NA | other | downstream | 1640241 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 3167212 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 3200500 | 45187119 ~ 45236944 (+) |
